| ID | SAVERM_6439
| Type | CDS
|
| From | 7716757
| nt length | 978
|
| To | 7715780
| aa length | 325
|
| Gene | dnaQ1
| pI | 6.61
|
| Definition | putative DNA polymerase III epsilon subunit
| M.W (Da) | 35538
|
| Note | PF00929: Exonuclease
| AseI frg. | S
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | DNA replication
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1827 putative DNA polymerase III epsilon chain | 539 | 0.0e+00
|
| sgr | SGR_5666 putative DNA polymerase III epsilon subunit | 530 | 0.0e+00
|
| sam | SAM23877_1898 putative DNA polymerase III, epsilon chain | 543 | 0.0e+00
|
| scab | SCAB71161 hypothetical protein | 565 | 0.0e+00
|
| mtub | gi|15610847 DNA polymerase III subunit epsilon [Mycobacterium tuberculosis H37Rv] | 205 | 2.9e-54
|
| cglu | gi|19551498 COG0847:DNA polymerase III epsilon subunit and related 3'-5' exonucleases [Corynebacterium glutamicum] | 80 | 7.6e-17
|
| ecoli | gi|16128202 DNA polymerase III subunit epsilon [Escherichia coli K12] | 65 | 6.1e-12
|
| paer | PA1816 [gene=dnaQ] [prot=DNA polymerase III, epsilon chain] [comment=PA1816] | 70 | 2.0e-13
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| RNase_T | 1 | Exonuclease | 24-176 | 80.8 | 1.5e-22
|
| BRCT | 1 | BRCA1 C Terminus (BRCT) domain | 244-310 | 22.5 | 0.00011
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3003 | Seems to have no N-terminal signal seq.
|