| ID | SAVERM_6481
| Type | CDS
|
| From | 7760380
| nt length | 432
|
| To | 7760811
| aa length | 143
|
| Gene |
| pI | 5.09
|
| Definition | putative membrane protein
| M.W (Da) | 14661
|
| Note | PF01957: Nodulation efficiency protein D (NfeD)
| AseI frg. | S
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1797 putative integral membrane protein | 199 | 2.0e-67
|
| sgr | SGR_5699 putative membrane protein | 164 | 1.0e-53
|
| sam | SAM23877_1864 putative activity regulator of membrane protease YbbK | 194 | 2.0e-65
|
| scab | SCAB71521 putative membrane protein | 206 | 3.0e-70
|
| sace | SACE_3782 membrane protein implicated in regulation of membrane protease activity | 77 | 1.0e-19
|
| nfar | nfa34720 hypothetical protein | 97 | 5.4e-22
|
| mtub | gi|15608625 hypothetical protein Rv1487 [Mycobacterium tuberculosis H37Rv] | 93 | 4.7e-21
|
| cglu | gi|19552747 COG1585:Membrane protein implicated in regulation of membrane protease activity [Corynebacterium glutamicum] | 88 | 8.4e-20
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| NfeD | 1 | NfeD-like C-terminal, partner-binding | 9-142 | 66.7 | 2.7e-18
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5585 | Seems to have a cleavable N-term signal seq.
|