| ID | SAVERM_6491
| Type | CDS
|
| From | 7775720
| nt length | 1044
|
| To | 7776763
| aa length | 347
|
| Gene | fepD
| pI | 10.33
|
| Definition | putative ABC transporter iron(III)/siderophore permease protein
| M.W (Da) | 35887
|
| Note | fhuB, Tat substrate, PF01032: FecCD transport family, iron-siderophore uptake system transmembrane component, putative IdeR-binding site: CGAGGGTAGGCTAACCTAA(7775696:7775714)
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1787 putative iron-siderophore uptake system transmembrane component | 544 | 0.0e+00
|
| sgr | SGR_454 putative FecCD-family membrane transport protein | 315 | 8.0e-107
|
| sam | SAM23877_1852 iron-enterobactin transporter subunit, membrane component of ABC superfamily | 546 | 0.0e+00
|
| scab | SCAB71661 putative ABC transporter iron(III)/siderophore permease protein | 541 | 0.0e+00
|
| sace | SACE_0411 putative ferrichrome transport system permease protein | 268 | 8.0e-89
|
| nfar | nfa25210 iron transporter | 303 | 1.5e-83
|
| cglu | gi|19551743 COG0609:ABC-type cobalamin/Fe3+-siderophores transport systems, permease components [Corynebacterium glutamicum] | 315 | 1.5e-87
|
| bsub | BG12955 yfmD; putative ferrichrome transport system permease protein | 230 | 8.1e-62
|
| ecoli | gi|16128573 ferric enterobactin (enterochelin) transport [Escherichia coli K12] | 258 | 5.3e-70
|
| paer | PA4160 [gene=fepD] [prot=ferric enterobactin transport protein FepD] [comment=PA4160] | 261 | 6.7e-71
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| FecCD | 1 | FecCD transport family | 35-341 | 300.4 | 1.2e-89
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202498598.1 | iron chelate uptake ABC transporter family permease subunit ...
| 1183 | 2.4e-160 |
| WP_168527415.1 | iron chelate uptake ABC transporter family permease subunit ...
| 1127 | 9.0e-152 |
| WP_067280210.1 | iron chelate uptake ABC transporter family permease subunit ...
| 1121 | 6.6e-151 |
| WP_151474646.1 | iron chelate uptake ABC transporter family permease subunit ...
| 1114 | 6.7e-150 |
| WP_037628625.1 | iron chelate uptake ABC transporter family permease subunit ...
| 1110 | 3.1e-149 |
| PBC64847.1 | iron ABC transporter permease [Streptomyces sp. Tue6028]
| 1109 | 4.4e-149 |
| WP_153291374.1 | iron chelate uptake ABC transporter family permease subunit ...
| 1109 | 4.6e-149 |
| WP_095933350.1 | iron chelate uptake ABC transporter family permease subunit ...
| 1108 | 5.6e-149 |
| WP_168490316.1 | iron chelate uptake ABC transporter family permease subunit ...
| 1108 | 6.3e-149 |
| WP_212727621.1 | iron chelate uptake ABC transporter family permease subunit ...
| 1108 | 6.6e-149 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.6647 | Seems to have no N-terminal signal seq.
|