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IDSAVERM_655 TypeCDS
From812915 nt length861
To813775 aa length286
Gene pI7.35
Definitionputative DNA-binding protein M.W (Da)31732
NotePF01381: Helix-turn-helix AseI frg.A
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO7817 putative DNA-binding protein2316.0e-76
samSAM23877_4493 DNA-binding protein2215.0e-72
scabSCAB5751 putative DNA-binding protein1611.0e-48
nfarnfa5020 DNA-binding protein1845.9e-48
ecoligi|16131046 hypothetical protein b3154 [Escherichia coli K12]285.4e-01

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; ecoli, Escherichia coli K-12;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain5-8462.92.4e-17

HTH_31Helix-turn-helix30-7932.27.8e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_136727262.1 helix-turn-helix transcriptional regulator [Streptomyces ory... 11034.5e-150
WP_127353923.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 10773.6e-146
WP_033320753.1 helix-turn-helix transcriptional regulator [Streptomyces yer... 10774.4e-146
WP_189323553.1 helix-turn-helix transcriptional regulator [Streptomyces fla... 10758.1e-146
WP_110695094.1 helix-turn-helix transcriptional regulator [Streptosporangiu... 10714.2e-145
WP_119730138.1 helix-turn-helix transcriptional regulator [Thermomonospora ... 10601.3e-143
WP_062013883.1 helix-turn-helix transcriptional regulator [Streptomyces hyg... 10601.5e-143
WP_030830058.1 helix-turn-helix transcriptional regulator [Streptomyces hyg... 10565.9e-143
WP_214634115.1 helix-turn-helix transcriptional regulator [Nonomuraea sp. N... 10558.9e-143
WP_236256329.1 helix-turn-helix transcriptional regulator [Streptomyces hyg... 10531.6e-142

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.3269 Seems to have no N-terminal signal seq.