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IDSAVERM_6605 TypeCDS
From7903172 nt length1068
To7902105 aa length355
Gene pI5.68
Definitionhypothetical protein M.W (Da)38308
NotePF01588: Putative tRNA binding domain AseI frg.G2
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
scabSCAB72751 hypothetical protein6220.0e+00

*scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RNA_ligase1RNA ligase159-34163.52.5e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_028801678.1 RNA ligase (ATP) [Streptomyces sp. 142MFCol3.1] 15260.0e+00
WP_095933252.1 RNA ligase (ATP) [Streptomyces sp. Tue6028] >gb 15170.0e+00
WP_200700943.1 RNA ligase (ATP) [Streptomyces sp. MBT33] >lcl 15170.0e+00
WP_152787058.1 RNA ligase (ATP) [Streptomyces phyllanthi] >gb 15150.0e+00
WP_123964130.1 RNA ligase (ATP) [Streptomyces sp. TLI_185] >gb 15100.0e+00
WP_232651757.1 RNA ligase (ATP) [Streptomyces sp. NR30] >lcl 15080.0e+00
WP_215161942.1 MULTISPECIES: RNA ligase (ATP) [unclassified Streptomyces] >... 15070.0e+00
WP_030946200.1 RNA ligase (ATP) [Streptomyces sp. NRRL S-646] 15060.0e+00
WP_143612917.1 MULTISPECIES: RNA ligase (ATP) [unclassified Streptomyces] >... 15050.0e+00
WP_235452933.1 RNA ligase (ATP) [Streptomyces olivochromogenes] >lcl 15050.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2036 Seems to have no N-terminal signal seq.