| ID | SAVERM_6617
| Type | CDS
|
| From | 7917956
| nt length | 324
|
| To | 7917633
| aa length | 107
|
| Gene |
| pI | 10.04
|
| Definition | putative membrane protein
| M.W (Da) | 11058
|
| Note | PF02656: Domain of unknown function DUF
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1688 hypothetical protein | 70 | 8.0e-18
|
| sgr | SGR_5814 conserved hypothetical protein | 109 | 2.0e-33
|
| sam | SAM23877_1745 hypothetical protein | 106 | 6.0e-32
|
| scab | SCAB72871 putative membrane protein | 117 | 4.0e-36
|
| nfar | nfa41360 hypothetical protein | 48 | 6.1e-08
|
| mtub | gi|15609410 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 40 | 2.6e-05
|
| bsub | BG11040 dgkA, dgk, yqxF; diacylglycerol kinase [EC:2.7.1.107] | 26 | 3.4e-01
|
| ecoli | gi|16131545 hypothetical protein b3675 [Escherichia coli K12] | 39 | 4.3e-05
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF202 | 1 | Domain of unknown function (DUF202) | 9-72 | 48.6 | 7.9e-13
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_066996245.1 | DUF202 domain-containing protein [Streptomyces cellostaticus...
| 293 | 1.8e-32 |
| SMF22440.1 | protein of unknown function [Streptomyces sp. Amel2xC10]
| 282 | 7.0e-31 |
| WP_107429198.1 | DUF202 domain-containing protein [Streptomyces sp. Amel2xC10...
| 281 | 1.1e-30 |
| WP_057614395.1 | DUF202 domain-containing protein [Streptomyces sp. Root369] ...
| 280 | 1.6e-30 |
| WP_078632966.1 | DUF202 domain-containing protein [Streptomyces antibioticus]...
| 280 | 1.6e-30 |
| WP_189187808.1 | DUF202 domain-containing protein [Streptomyces albiflavescen...
| 278 | 3.2e-30 |
| WP_093745427.1 | DUF202 domain-containing protein [Streptomyces sp. PAN_FS17]...
| 278 | 3.4e-30 |
| WP_093866987.1 | DUF202 domain-containing protein [Streptomyces sp. KS_5] >em...
| 278 | 3.4e-30 |
| WP_193480357.1 | DUF202 domain-containing protein [Streptomyces janthinus]
| 278 | 3.6e-30 |
| WP_059421529.1 | DUF202 domain-containing protein [Streptomyces azureus]
| 278 | 3.6e-30 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5203 | Seems to have no N-terminal signal seq.
|