| ID | SAVERM_6618
| Type | CDS
|
| From | 7918345
| nt length | 393
|
| To | 7917953
| aa length | 130
|
| Gene |
| pI | 10.39
|
| Definition | putative membrane protein
| M.W (Da) | 14419
|
| Note | PF02656: Domain of unknown function DUF
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1687 hypothetical protein | 172 | 1.0e-57
|
| sgr | SGR_5815 conserved hypothetical protein | 171 | 5.0e-57
|
| sam | SAM23877_1744 putative inner membrane protein | 186 | 4.0e-63
|
| scab | SCAB72881 putative membrane protein | 196 | 6.0e-67
|
| sace | SACE_6375 protein of unknown function DUF202 | 72 | 6.0e-18
|
| nfar | nfa41370 hypothetical protein | 80 | 3.3e-17
|
| mtub | gi|15609409 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 75 | 8.4e-16
|
| cglu | gi|19551353 COG2149:Predicted membrane protein [Corynebacterium glutamicum] | 82 | 6.5e-18
|
| ecoli | gi|16131546 hypothetical protein b3676 [Escherichia coli K12] | 83 | 3.1e-18
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF202 | 1 | Domain of unknown function (DUF202) | 27-91 | 52.7 | 4.1e-14
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_189187809.1 | DUF202 domain-containing protein [Streptomyces albiflavescen...
| 458 | 6.6e-57 |
| WP_189290763.1 | DUF202 domain-containing protein [Streptomyces fumigatiscler...
| 453 | 3.9e-56 |
| WP_126270939.1 | DUF202 domain-containing protein [Streptomyces aquilus] >gb
| 452 | 5.6e-56 |
| WP_109499941.1 | DUF202 domain-containing protein [Streptomyces sp. Act143] >...
| 451 | 8.1e-56 |
| OPG08138.1 | hypothetical protein B1R27_11175 [Streptomyces sp. GKU 895]
| 451 | 9.0e-56 |
| WP_043735604.1 | DUF202 domain-containing protein [Streptomyces zinciresisten...
| 450 | 1.0e-55 |
| WP_097261910.1 | DUF202 domain-containing protein [Streptomyces sp. TLI_55] >...
| 450 | 1.1e-55 |
| WP_217207397.1 | DUF202 domain-containing protein [Streptomyces sp. AC550_RSS...
| 450 | 1.3e-55 |
| WP_048586074.1 | DUF202 domain-containing protein [Streptomyces viridochromog...
| 450 | 1.3e-55 |
| WP_062724336.1 | DUF202 domain-containing protein [Streptomyces caeruleatus] ...
| 448 | 2.1e-55 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.6901 | Seems to have no N-terminal signal seq.
|