| ID | SAVERM_6630
| Type | CDS
|
| From | 7930737
| nt length | 702
|
| To | 7931438
| aa length | 233
|
| Gene | idnR
| pI | 6.44
|
| Definition | putative GntR-family transcriptional regulator
| M.W (Da) | 25374
|
| Note | PF07729: FCD domain
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1678 putative transcriptional regulator | 407 | 5.0e-147
|
| sgr | SGR_5823 putative GntR-family transcriptional regulator | 365 | 2.0e-130
|
| sam | SAM23877_1737 Transcriptional regulator | 403 | 2.0e-145
|
| scab | SCAB72961 putative GntR-family transcriptional regulator | 400 | 5.0e-144
|
| sace | SACE_3357 GntR-family transcriptional regulator | 187 | 6.0e-60
|
| cglu | gi|19553725 COG2186:Transcriptional regulators [Corynebacterium glutamicum] | 138 | 2.6e-34
|
| ecoli | gi|49176392 transcriptional repressor for galactonate utilization (GntR family) [Escherichia coli K12] | 98 | 4.2e-22
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| FCD | 1 | FCD domain | 101-219 | 67.5 | 1.3e-18
|
| GntR | 1 | Bacterial regulatory proteins, gntR family | 11-70 | 47.7 | 8e-13
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_028801653.1 | FadR family transcriptional regulator [Streptomyces sp. 142M...
| 1084 | 6.3e-149 |
| WP_095933227.1 | FadR family transcriptional regulator [Streptomyces sp. Tue6...
| 1084 | 6.8e-149 |
| WP_189187822.1 | FadR family transcriptional regulator [Streptomyces albiflav...
| 1081 | 1.4e-148 |
| WP_153291490.1 | FadR family transcriptional regulator [Streptomyces fagopyri...
| 1081 | 1.7e-148 |
|
| 1080 | 2.0e-148 |
| WP_128428007.1 | FadR family transcriptional regulator [Streptomyces cyaneus]
| 1079 | 3.0e-148 |
| WP_194048039.1 | FadR family transcriptional regulator [Streptomyces ferrugin...
| 1077 | 5.8e-148 |
| WP_228618599.1 | FadR family transcriptional regulator [Streptomyces sp. JA03...
| 1077 | 6.0e-148 |
| NUP18320.1 | FadR family transcriptional regulator [Streptomyces sp.] >gb
| 1077 | 7.2e-148 |
| WP_168527317.1 | FadR family transcriptional regulator [Streptomyces sp. RPA4...
| 1076 | 1.1e-147 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0983 | Seems to have no N-terminal signal seq.
|