| ID | SAVERM_6679
| Type | CDS
|
| From | 7992097
| nt length | 219
|
| To | 7992315
| aa length | 72
|
| Gene |
| pI | 3.8
|
| Definition | hypothetical protein
| M.W (Da) | 8003
|
| Note | PF05639: Protein of unknown function (DUF797)
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1646 hypothetical protein | 137 | 3.0e-45
|
| sgr | SGR_5858 conserved hypothetical protein | 134 | 5.0e-44
|
| sam | SAM23877_1701 Prokaryotic ubiquitin-like protein Pup | 134 | 3.0e-44
|
| scab | SCAB73461 hypothetical protein | 124 | 7.0e-40
|
| sace | SACE_2250 hypothetical protein | 66 | 3.0e-17
|
| nfar | nfa31730 hypothetical protein | 69 | 5.0e-14
|
| mtub | gi|15609248 hypothetical protein Rv2111c [Mycobacterium tuberculosis H37Rv] | 64 | 1.5e-12
|
| cglu | gi|19552709 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 53 | 1.1e-09
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Pup | 1 | Pup-like protein | 4-72 | 105.1 | 2.5e-30
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_053852487.1 | MULTISPECIES: ubiquitin-like protein Pup [unclassified Strep...
| 173 | 2.8e-15 |
| WP_007380863.1 | MULTISPECIES: ubiquitin-like protein Pup [Streptomyces] >gb
| 173 | 3.0e-15 |
| WP_189930451.1 | ubiquitin-like protein Pup [Streptomyces sulfonofaciens] >db...
| 171 | 6.2e-15 |
| WP_055622958.1 | MULTISPECIES: ubiquitin-like protein Pup [unclassified Strep...
| 171 | 6.4e-15 |
| WP_119101879.1 | ubiquitin-like protein Pup [Streptomyces sporangiiformans] >...
| 171 | 6.5e-15 |
| WP_007504729.1 | ubiquitin-like protein Pup [Streptomyces zinciresistens] >gb...
| 171 | 6.6e-15 |
| WP_138045458.1 | ubiquitin-like protein Pup [Streptomyces montanus] >lcl
| 171 | 7.3e-15 |
| WP_037651273.1 | MULTISPECIES: ubiquitin-like protein Pup [Streptomyces] >lcl...
| 171 | 7.3e-15 |
| WP_161704060.1 | ubiquitin-like protein Pup [Streptomyces boluensis] >gb
| 170 | 7.5e-15 |
| WP_020128324.1 | MULTISPECIES: ubiquitin-like protein Pup [Streptomyces] >gb
| 170 | 7.8e-15 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.5642 | Seems to have no N-terminal signal seq.
|