| ID | SAVERM_6681
| Type | CDS
|
| From | 7992894
| nt length | 846
|
| To | 7993739
| aa length | 281
|
| Gene | prcB1
| pI | 4.68
|
| Definition | putative 20S proteasome beta-subunit
| M.W (Da) | 30292
|
| Note | PF00227: Proteasome A-type and B-type
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | protein modification
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1644 20S proteasome beta-subunit precursor | 518 | 0.0e+00
|
| sgr | SGR_5859 putative 20S proteasome beta-subunit | 520 | 0.0e+00
|
| sam | SAM23877_1699 Proteasome subunit beta | 480 | 9.0e-175
|
| scab | SCAB73471 putative 20S proteasome beta-subunit | 534 | 0.0e+00
|
| sace | SACE_2251 20S proteasome beta-subunit precursor | 325 | 3.0e-113
|
| nfar | nfa31720 prcB proteasome beta subunit | 254 | 4.5e-69
|
| mtub | gi|15609247 proteasome (beta subunit) PrcB [Mycobacterium tuberculosis H37Rv] | 257 | 7.0e-70
|
| bsub | BG10966 clpQ, hslV, codW; two-component ATP-dependent protease [ClpY] [EC:3.4.99.-] | 39 | 2.6e-04
|
| ecoli | gi|16131770 ATP-dependent protease peptidase subunit [Escherichia coli K12] | 47 | 8.3e-07
|
| paer | PA5053 [gene=hslV] [prot=heat shock protein HslV] [comment=PA5053] | 44 | 1.3e-05
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Proteasome | 1 | Proteasome subunit | 52-231 | 129.2 | 1.2e-37
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1020 | Seems to have no N-terminal signal seq.
|