| ID | SAVERM_6682
| Type | CDS
|
| From | 7993807
| nt length | 762
|
| To | 7994568
| aa length | 253
|
| Gene | prcA
| pI | 4.71
|
| Definition | putative 20S proteasome alpha-subunit
| M.W (Da) | 27708
|
| Note | PF00227: Proteasome A-type and B-type
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | protein modification
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1643 20S proteasome alpha-subunit | 460 | 2.0e-167
|
| sgr | SGR_5860 putative 20S proteasome alpha-subunit | 450 | 3.0e-163
|
| sam | SAM23877_1698 Proteasome subunit alpha | 451 | 1.0e-163
|
| scab | SCAB73481 putative 20S proteasome alpha-subunit | 460 | 3.0e-167
|
| sace | SACE_2252 20S proteasome alpha-subunit | 271 | 1.0e-92
|
| nfar | nfa31710 prcA proteasome alpha subunit | 227 | 8.8e-61
|
| mtub | gi|15609246 proteasome (alpha subunit) PrcA [Mycobacterium tuberculosis H37Rv] | 240 | 5.9e-65
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Proteasome | 1 | Proteasome subunit | 25-191 | 97.9 | 4.5e-28
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1873 | Seems to have no N-terminal signal seq.
|