| ID | SAVERM_6693
| Type | CDS
|
| From | 8003476
| nt length | 948
|
| To | 8004423
| aa length | 315
|
| Gene | tatC
| pI | 5.91
|
| Definition | putative sec-independent protein translocase protein TatC
| M.W (Da) | 34628
|
| Note | PF00902: Sec-independent protein translocase protein (TatC)
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1632 hypothetical integral membrane protein SCI41.15c | 481 | 1.0e-173
|
| sgr | SGR_5871 putative sec-independent protein translocase protein TatC | 385 | 1.0e-135
|
| sam | SAM23877_1687 Sec-independent protein translocase protein TatC | 474 | 5.0e-171
|
| scab | SCAB73601 putative sec-independent protein translocase protein TatC | 432 | 4.0e-154
|
| sace | SACE_2263 sec-independent protein translocase TatC | 173 | 8.0e-53
|
| nfar | nfa31630 hypothetical protein | 184 | 1.1e-47
|
| mtub | gi|15609230 Probable Sec-independent protein translocase transmembrane protein tatC [Mycobacterium tuberculosis H37Rv] | 181 | 4.3e-47
|
| cglu | gi|19552704 COG0805:Sec-independent protein secretion pathway component TatC [Corynebacterium glutamicum] | 156 | 1.4e-39
|
| bsub | BG12207 tatCY, ydiJ; component of the twin-arginine translocation pathway | 108 | 4.1e-25
|
| ecoli | gi|16131687 component of Sec-independent translocase [Escherichia coli K12] | 115 | 4.9e-27
|
| paer | PA5070 [gene=tatC] [prot=transport protein TatC] [comment=PA5070] | 122 | 5.5e-29
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| TatC | 1 | Sec-independent protein translocase protein (TatC) | 20-245 | 203.1 | 3.9e-60
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_095933187.1 | twin-arginine translocase subunit TatC [Streptomyces sp. Tue...
| 1425 | 0.0e+00 |
| WP_028801603.1 | twin-arginine translocase subunit TatC [Streptomyces sp. 142...
| 1417 | 0.0e+00 |
| WP_164372472.1 | twin-arginine translocase subunit TatC [Streptomyces sp. SID...
| 1384 | 0.0e+00 |
| WP_177324031.1 | twin-arginine translocase subunit TatC [Streptomyces mirabil...
| 1380 | 0.0e+00 |
| WP_180293061.1 | twin-arginine translocase subunit TatC [Streptomyces mirabil...
| 1379 | 0.0e+00 |
| WP_179858121.1 | MULTISPECIES: twin-arginine translocase subunit TatC [unclas...
| 1379 | 0.0e+00 |
| WP_192582316.1 | twin-arginine translocase subunit TatC [Streptomyces tritici...
| 1377 | 0.0e+00 |
| WP_095855587.1 | MULTISPECIES: twin-arginine translocase subunit TatC [unclas...
| 1375 | 0.0e+00 |
| QIY94855.1 | twin-arginine translocase subunit TatC [Streptomyces sp. S1D4-11]
| 1374 | 0.0e+00 |
| WP_081223479.1 | twin-arginine translocase subunit TatC [Streptomyces sp. M41...
| 1372 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.3951 | Seems to have no N-terminal signal seq.
|