| ID | SAVERM_6716
| Type | CDS
|
| From | 8031437
| nt length | 2616
|
| To | 8034052
| aa length | 871
|
| Gene | opuAB
| pI | 9.16
|
| Definition | putative glycine betaine ABC transport system permease protein
| M.W (Da) | 94925
|
| Note | PF04069: Substrate binding domain of ABC-type glycine betaine transport system
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1620 opuABC glycine betaine transport system permease protein | 1424 | 0.0e+00
|
| sgr | SGR_5891 putative glycine betaine ABC transporter substrate-binding and permease component | 1221 | 0.0e+00
|
| sam | SAM23877_1675 Glycine/betaine ABC transporter permease | 1422 | 0.0e+00
|
| sace | SACE_2224 glycine betaine transport system permease protein | 290 | 4.0e-92
|
| cglu | gi|19552674 COG3639:ABC-type phosphate/phosphonate transport system, permease component [Corynebacterium glutamicum] | 78 | 1.5e-15
|
| bsub | BG11371 opuAB; glycine betaine transport system permease protein | 248 | 1.4e-66
|
| ecoli | gi|16130592 glycine/betaine/proline transport protein (ABC superfamily, membrane) [Escherichia coli K12] | 253 | 5.0e-68
|
| paer | PA5095 [gene=PA5095] [prot=probable permease of ABC transporter] [comment=PA5095] | 225 | 1.5e-59
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| OpuAC | 2 | Substrate binding domain of ABC-type glycine betaine transport system | 338-586, 612-860 | 414.6 | 1.5e-124
|
| BPD_transp_1 | 1 | Binding-protein-dependent transport system inner membrane component | 106-262 | 79.2 | 2.9e-22
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_181651878.1 | ABC transporter permease/substrate binding protein [Streptom...
| 3842 | 0.0e+00 |
| WP_143607637.1 | MULTISPECIES: ABC transporter permease/substrate binding pro...
| 3840 | 0.0e+00 |
| WP_168490145.1 | MULTISPECIES: ABC transporter permease/substrate binding pro...
| 3836 | 0.0e+00 |
| WP_097283970.1 | ABC transporter permease/substrate binding protein [Streptom...
| 3836 | 0.0e+00 |
| WP_075027665.1 | ABC transporter permease/substrate binding protein [Streptom...
| 3835 | 0.0e+00 |
| WP_190169615.1 | ABC transporter permease/substrate binding protein [Streptom...
| 3833 | 0.0e+00 |
| WP_143654740.1 | ABC transporter permease/substrate binding protein [Streptom...
| 3832 | 0.0e+00 |
| WP_217566390.1 | ABC transporter permease/substrate binding protein [Streptom...
| 3831 | 0.0e+00 |
| WP_143601115.1 | MULTISPECIES: ABC transporter permease/substrate binding pro...
| 3829 | 0.0e+00 |
| WP_143626813.1 | MULTISPECIES: ABC transporter permease/substrate binding pro...
| 3828 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5522 | Seems to have no N-terminal signal seq.
|