| ID | SAVERM_6720
| Type | CDS
|
| From | 8036490
| nt length | 756
|
| To | 8037245
| aa length | 251
|
| Gene |
| pI | 5.76
|
| Definition | hypothetical protein
| M.W (Da) | 27250
|
| Note | PF01497: Periplasmic binding protein
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1618 hypothetical protein | 362 | 6.0e-129
|
| sgr | SGR_5893 conserved hypothetical protein | 289 | 4.0e-100
|
| sam | SAM23877_1672 hypothetical protein | 323 | 7.0e-113
|
| nfar | nfa10330 hypothetical protein | 239 | 2.2e-64
|
| cglu | gi|19553312 COG0614:ABC-type cobalamin/Fe3+-siderophores transport systems, periplasmic components [Corynebacterium glutamicum] | 45 | 3.3e-06
|
| bsub | BG14143 yvrC; putative iron transport system substrate-binding protein | 49 | 2.2e-07
|
| ecoli | gi|16128151 vitamin B12-transporter protein BtuF [Escherichia coli K12] | 48 | 5.5e-07
|
| paer | PA4045 [gene=PA4045] [prot=conserved hypothetical protein] [comment=PA4045] | 65 | 3.5e-12
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Peripla_BP_2 | 1 | Periplasmic binding protein | 125-202 | 49.8 | 3e-13
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_152773212.1 | helical backbone metal receptor [Streptomyces spongiae] >gb
| 1015 | 5.2e-138 |
|
| 1004 | 2.8e-136 |
| MPY45053.1 | cobalamin-binding protein [Streptomyces phyllanthi]
| 997 | 2.7e-135 |
| WP_150943450.1 | helical backbone metal receptor [Streptomyces luteolifulvus]...
| 996 | 3.5e-135 |
| WP_043438730.1 | helical backbone metal receptor [Streptomyces nodosus] >gb
| 994 | 7.9e-135 |
| MPY54929.1 | ABC transporter substrate-binding protein [Streptomyces acidicola...
| 993 | 9.8e-135 |
| WP_086729188.1 | helical backbone metal receptor [Streptomyces carpinensis]
| 992 | 1.6e-134 |
| WP_128427924.1 | helical backbone metal receptor [Streptomyces cyaneus]
| 989 | 4.1e-134 |
| WP_053754310.1 | helical backbone metal receptor [Streptomyces sp. MMG1533]
| 988 | 6.0e-134 |
| EKX63004.1 | hypothetical protein STRIP9103_01641 [Streptomyces ipomoeae 91-03...
| 988 | 7.7e-134 |
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | | Seems to have no N-terminal signal seq.
|