| ID | SAVERM_6789
| Type | CDS
|
| From | 8105882
| nt length | 1101
|
| To | 8106982
| aa length | 366
|
| Gene | metN
| pI | 6.43
|
| Definition | putative ABC transporter ATP-binding protein (D-methionine transport system ATP-binding protein)
| M.W (Da) | 39015
|
| Note | PF00005: ABC transporter
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1559 putative ABC transporter ATP-binding protein | 648 | 0.0e+00
|
| sgr | SGR_5978 putative ABC transporter ATP-binding protein | 595 | 0.0e+00
|
| sam | SAM23877_1614 DL-methionine transporter subunit, ATP-binding component of ABC superfamily | 617 | 0.0e+00
|
| scab | SCAB74401 putative ABC transporter ATP-binding protein (D-methionine transport system ATP-binding protein) | 624 | 0.0e+00
|
| sace | SACE_0804 putative ABC transporter ATP-binding protein | 261 | 6.0e-86
|
| nfar | nfa44090 ABC transporter ATP-binding protein | 240 | 1.2e-64
|
| cglu | gi|19551868 COG1135:Uncharacterized ABC-type transport system ATPase component [Corynebacterium glutamicum] | 244 | 3.6e-66
|
| bsub | BG14015 yusC; putative unknown ABC transport system ATP-binding protein | 297 | 7.5e-82
|
| ecoli | gi|16128192 D- and L-methionine transport protein (ABC superfamily, atp_bind) [Escherichia coli K12] | 309 | 2.2e-85
|
| paer | PA5503 [gene=PA5503] [prot=probable ATP-binding component of ABC transporter] [comment=PA5503] | 266 | 2.2e-72
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ABC_tran | 1 | ABC transporter | 40-194 | 116.1 | 1.5e-33
|
| NIL | 1 | NIL domain | 278-350 | 63.8 | 9.1e-18
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_099500181.1 | MULTISPECIES: ATP-binding cassette domain-containing protein...
| 1689 | 0.0e+00 |
|
| 1675 | 0.0e+00 |
|
| 1639 | 0.0e+00 |
| QTD97398.1 | Methionine import ATP-binding protein MetN [Streptomyces cyanogen...
| 1638 | 0.0e+00 |
| WP_189772963.1 | ATP-binding cassette domain-containing protein [Streptomyces...
| 1636 | 0.0e+00 |
| OYP18662.1 | methionine ABC transporter ATP-binding protein [Streptomyces sp. ...
| 1636 | 0.0e+00 |
| POX59231.1 | methionine ABC transporter ATP-binding protein [Streptomyces sp. ...
| 1635 | 0.0e+00 |
| WP_106972070.1 | ATP-binding cassette domain-containing protein [Streptomyces...
| 1634 | 0.0e+00 |
| OAH11995.1 | methionine import ATP-binding protein MetN [Streptomyces jeddahen...
| 1633 | 0.0e+00 |
| KOV97583.1 | methionine ABC transporter ATP-binding protein [Streptomyces sp. ...
| 1633 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1509 | Seems to have no N-terminal signal seq.
|