| ID | SAVERM_6823
| Type | CDS
|
| From | 8145199
| nt length | 564
|
| To | 8145762
| aa length | 187
|
| Gene | hit
| pI | 6.22
|
| Definition | putative histidine triad (HIT) family protein
| M.W (Da) | 20304
|
| Note | PF01230: HIT domain
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1530 hypothetical HIT family protein SCL2.20c | 332 | 1.0e-118
|
| sgr | SGR_6005 conserved hypothetical protein | 343 | 5.0e-123
|
| sam | SAM23877_1581 AP-4-A phosphorylase | 365 | 5.0e-132
|
| scab | SCAB74771 putative histidine triad (HIT) family protein | 366 | 2.0e-132
|
| sace | SACE_2005 histidine triad (HIT) protein | 227 | 8.0e-78
|
| nfar | nfa37110 hypothetical protein | 216 | 7.5e-58
|
| mtub | gi|15609750 hypothetical protein Rv2613c [Mycobacterium tuberculosis H37Rv] | 202 | 1.5e-53
|
| cglu | gi|19552880 COG0537:Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Corynebacterium glutamicum] | 158 | 1.3e-40
|
| paer | PA1306 [gene=PA1306] [prot=probable HIT family protein] [comment=PA1306] | 59 | 2.1e-10
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| HIT | 1 | HIT domain | 62-151 | 48.8 | 8.1e-13
|
| DcpS_C | 1 | Scavenger mRNA decapping enzyme C-term binding | 48-149 | 29.1 | 9.9e-07
|
| CwfJ_C_1 | 1 | Protein similar to CwfJ C-terminus 1 | 45-111 | 27.1 | 2.9e-06
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_200421227.1 | HIT domain-containing protein [Streptomyces sp. Y2F8-2] >dbj...
| 902 | 9.0e-123 |
| WP_189187989.1 | HIT domain-containing protein [Streptomyces albiflavescens] ...
| 901 | 1.2e-122 |
| WP_103842611.1 | HIT domain-containing protein [Streptomyces sp. Ru72] >gb
| 901 | 1.6e-122 |
| WP_200300479.1 | HIT domain-containing protein [Streptomyces adelaidensis]
| 896 | 7.3e-122 |
| WP_043438589.1 | MULTISPECIES: HIT domain-containing protein [Streptomyces] >...
| 896 | 8.9e-122 |
| WP_086733988.1 | HIT domain-containing protein [Streptomyces glaucescens]
| 896 | 8.9e-122 |
| OSZ58773.1 | HIT family hydrolase [Streptomyces pharetrae CZA14]
| 896 | 9.1e-122 |
| WP_095933064.1 | HIT domain-containing protein [Streptomyces sp. Tue6028] >gb...
| 895 | 9.6e-122 |
| WP_190169773.1 | HIT domain-containing protein [Streptomyces mirabilis] >dbj
| 895 | 1.3e-121 |
| WP_028801497.1 | HIT domain-containing protein [Streptomyces sp. 142MFCol3.1]
| 894 | 1.3e-121 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3061 | Seems to have no N-terminal signal seq.
|