| ID | SAVERM_6836
| Type | CDS
|
| From | 8159193
| nt length | 504
|
| To | 8159696
| aa length | 167
|
| Gene | yajC
| pI | 4.17
|
| Definition | putative preprotein translocase YajC subunit
| M.W (Da) | 17719
|
| Note | PF02699: Preprotein translocase subunit
| AseI frg. | G2
|
| SignalP v.4.0 | Signal peptide | plot
| Category | protein secretion
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1517 putative secreted protein | 230 | 5.0e-79
|
| sgr | SGR_6018 putative secreted protein | 166 | 7.0e-54
|
| sam | SAM23877_1568 Secreted protein | 248 | 2.0e-86
|
| scab | SCAB74901 putative preprotein translocase YajC subunit | 232 | 8.0e-80
|
| nfar | nfa36920 hypothetical protein | 48 | 3.8e-07
|
| mtub | gi|15609725 preprotein translocase subunit YajC [Mycobacterium tuberculosis H37Rv] | 54 | 3.2e-09
|
| cglu | gi|19552869 COG1862:Preprotein translocase subunit YajC [Corynebacterium glutamicum] | 41 | 2.6e-05
|
| bsub | BG13785 yrbF; similar to hypothetical proteins | 48 | 1.5e-07
|
| ecoli | gi|16130201 unknown CDS [Escherichia coli K12] | 27 | 5.4e-01
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| YajC | 1 | Preprotein translocase subunit | 5-78 | 59.0 | 2.9e-16
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_189188002.1 | preprotein translocase subunit YajC [Streptomyces albiflaves...
| 703 | 4.2e-93 |
| WP_059125567.1 | MULTISPECIES: preprotein translocase subunit YajC [unclassif...
| 697 | 3.7e-92 |
| WP_103547811.1 | preprotein translocase subunit YajC [Streptomyces populi] >g...
| 693 | 2.1e-91 |
|
| 691 | 3.0e-91 |
| WP_128378382.1 | preprotein translocase subunit YajC [Streptomyces cavernae]
| 688 | 7.8e-91 |
|
| 691 | 8.2e-91 |
| WP_099500223.1 | MULTISPECIES: preprotein translocase subunit YajC [Streptomy...
| 688 | 1.1e-90 |
| WP_067365921.1 | preprotein translocase subunit YajC [Streptomyces olivochrom...
| 680 | 1.6e-89 |
| QIY94714.1 | preprotein translocase subunit YajC [Streptomyces sp. S1D4-11]
| 680 | 1.9e-89 |
| WP_148007800.1 | preprotein translocase subunit YajC [Streptomyces sp. me109]...
| 678 | 2.9e-89 |
PSORT result
| Localization | Certainty | PSORT said
|
| outside | 0.3000 | Seems to have a cleavable N-term signal seq.
|