| ID | SAVERM_6842
| Type | CDS
|
| From | 8168875
| nt length | 834
|
| To | 8168042
| aa length | 277
|
| Gene | ppiB
| pI | 10.59
|
| Definition | putative peptidyl-prolyl cis-trans isomerase, secreted
| M.W (Da) | 29419
|
| Note | PF00160: Cyclophilin type peptidyl-prolyl cis-trans isomerase
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | protein modification
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1510 putative peptidyl-prolyl cis-trans isomerase | 427 | 2.0e-153
|
| sgr | SGR_6024 putative peptidyl-prolyl cis-trans isomerase | 224 | 8.0e-74
|
| sam | SAM23877_1562 putative peptidyl-prolyl cis-trans isomerase B | 448 | 8.0e-162
|
| scab | SCAB74981 putative peptidyl-prolyl cis-trans isomerase, secreted | 392 | 1.0e-139
|
| sace | SACE_2030 putative peptidyl-prolyl cis-trans isomerase | 135 | 5.0e-39
|
| nfar | nfa36650 peptidyl-prolyl cis-trans isomerase | 173 | 1.7e-44
|
| mtub | gi|15609719 PROBABLE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE B PPIB (CYCLOPHILIN) (PPIASE) (ROTAMASE) (PEPTIDYLPROLYL ISOMERASE) [Mycobacterium tuberculosis H37Rv] | 163 | 1.0e-41
|
| cglu | gi|19552861 COG0652:Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Corynebacterium glutamicum] | 149 | 1.4e-37
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Pro_isomerase | 1 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 117-273 | 98.0 | 6e-28
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_237529742.1 | peptidylprolyl isomerase [Streptomyces sp. SID5469]
| 955 | 3.5e-128 |
| WP_081223362.1 | peptidylprolyl isomerase [Streptomyces sp. M41(2017)] >gb
| 929 | 5.1e-124 |
| WP_095855778.1 | MULTISPECIES: peptidylprolyl isomerase [unclassified Strepto...
| 927 | 1.1e-123 |
| WP_099500229.1 | MULTISPECIES: peptidylprolyl isomerase [Streptomyces] >gb
| 924 | 3.7e-123 |
| WP_168527186.1 | peptidylprolyl isomerase [Streptomyces sp. RPA4-2] >gb
| 922 | 5.8e-123 |
| WP_148007806.1 | peptidylprolyl isomerase [Streptomyces sp. me109] >lcl
| 922 | 7.3e-123 |
| WP_168490042.1 | peptidylprolyl isomerase [Streptomyces sp. RLB1-33] >gb
| 920 | 1.1e-122 |
| QIY94709.1 | peptidylprolyl isomerase [Streptomyces sp. S1D4-11]
| 920 | 1.4e-122 |
| WP_212727701.1 | peptidylprolyl isomerase [Streptomyces mirabilis] >gb
| 918 | 2.7e-122 |
| WP_075027561.1 | MULTISPECIES: peptidylprolyl isomerase [Streptomyces] >dbj
| 917 | 3.1e-122 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.3675 | Seems to have no N-terminal signal seq.
|