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IDSAVERM_6844 TypeCDS
From8169763 nt length1263
To8171025 aa length420
GenehisS pI4.92
Definitionputative histidyl-tRNA synthetase M.W (Da)45754
NotePF00587: tRNA synthetase class II core domain (G, H, P, S and T) AseI frg.G2
SignalP v.4.0Non-secretory protein | plot Categoryaminoacyl-tRNA-synthetase

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO1508 hisS histidyl tRNA synthetase7870.0e+00
sgrSGR_6026 putative histidyl-tRNA synthetase7390.0e+00
samSAM23877_1560 Histidine--tRNA ligase7810.0e+00
scabSCAB75001 putative histidyl-tRNA synthetase8130.0e+00
saceSACE_2032 histidyl-tRNA synthetase4757.0e-168
nfarnfa36640 hisS histidyl-tRNA synthetase4808.4e-137
mtubgi|15609717 histidyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]4631.1e-131
cglugi|19552859 COG0124:Histidyl-tRNA synthetase [Corynebacterium glutamicum]4612.9e-131
bsubBG12605 hisS; histidyl-tRNA synthetase [EC:6.1.1.21]3377.7e-94
ecoligi|16130439 histidyl-tRNA synthetase [Escherichia coli K12]3115.2e-86
paerPA3802 [gene=hisS] [prot=histidyl-tRNA synthetase] [comment=PA3802]3061.7e-84

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

tRNA-synt_His1Histidyl-tRNA synthetase9-309143.58.2e-42

tRNA-synt_2b1tRNA synthetase class II core domain (G, H, P, S and T)67-31468.56.6e-19

HGTP_anticodon1Anticodon binding domain331-41744.61.1e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_165996709.1 histidine--tRNA ligase [Streptomyces sp. JB150] >gb 19890.0e+00
WP_141309376.1 histidine--tRNA ligase [Streptomyces spinoverrucosus] >dbj 19860.0e+00
WP_180685278.1 histidine--tRNA ligase [Streptomyces sp. TRM72054] >lcl 19810.0e+00
19790.0e+00
WP_142196502.1 histidine--tRNA ligase [Streptomyces calvus] >lcl 19770.0e+00
19760.0e+00
WP_150479784.1 histidine--tRNA ligase [Streptomyces coeruleorubidus] >gb 19750.0e+00
WP_030038529.1 histidine--tRNA ligase [Streptomyces resistomycificus] >gb 19750.0e+00
WP_189598322.1 histidine--tRNA ligase [Streptomyces pilosus] >dbj 19750.0e+00
19740.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2938 Seems to have no N-terminal signal seq.