| ID | SAVERM_6867
| Type | CDS
|
| From | 8194257
| nt length | 3309
|
| To | 8197565
| aa length | 1102
|
| Gene | carB
| pI | 4.58
|
| Definition | putative carbamoyl-phosphate synthase large subunit
| M.W (Da) | 117894
|
| Note | pyrAB, PF02786: Carbamoyl-phosphate synthase L chain, ATP binding domain
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of nucleotides & nucleic acids
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1483 carbamoylphosphate synthetase large chain | 2105 | 0.0e+00
|
| sgr | SGR_6051 putative carbamoyl-phosphate synthase large subunit | 2108 | 0.0e+00
|
| sam | SAM23877_1535 carbamoyl-phosphate synthase large subunit | 2118 | 0.0e+00
|
| scab | SCAB75231 putative carbamoyl-phosphate synthase large subunit | 2160 | 0.0e+00
|
| sace | SACE_2083 carbamoyl-phosphate synthase large subunit | 1546 | 0.0e+00
|
| nfar | nfa36190 carB carbamoyl-phosphate synthase large subunit | 1524 | 0.0e+00
|
| mtub | gi|57116856 carbamoyl-phosphate synthase large subunit [Mycobacterium tuberculosis H37Rv] | 1461 | 0.0e+00
|
| cglu | gi|19552821 COG0458:Carbamoylphosphate synthase large subunit (split gene in MJ) [Corynebacterium glutamicum] | 1420 | 0.0e+00
|
| bsub | BG10716 pyrAB; carbamoyl-phosphate synthase large chain [EC:6.3.5.5] | 966 | 0.0e+00
|
| ecoli | gi|16128027 carbamoyl-phosphate synthase large subunit [Escherichia coli K12] | 1101 | 0.0e+00
|
| paer | PA4756 [gene=carB] [prot=carbamoylphosphate synthetase large subunit] [comment=PA4756] | 1125 | 0.0e+00
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| CPSase_L_D2 | 2 | Carbamoyl-phosphate synthase L chain, ATP binding domain | 128-340, 677-879 | 338.7 | 1e-101
|
| CPSase_L_D3 | 1 | Carbamoyl-phosphate synthetase large chain, oligomerisation domain | 431-547 | 133.6 | 4.1e-39
|
| MGS | 1 | MGS-like domain | 975-1065 | 77.8 | 5e-22
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202498661.1 | carbamoyl-phosphate synthase large subunit [Streptomyces sp....
| 5520 | 0.0e+00 |
| WP_101387368.1 | carbamoyl-phosphate synthase large subunit [Streptomyces sp....
| 5480 | 0.0e+00 |
| WP_190089525.1 | carbamoyl-phosphate synthase large subunit [Streptomyces mel...
| 5479 | 0.0e+00 |
| WP_168490023.1 | MULTISPECIES: carbamoyl-phosphate synthase large subunit [St...
| 5472 | 0.0e+00 |
| QIY94683.1 | carbamoyl-phosphate synthase large subunit [Streptomyces sp. S1D4...
| 5463 | 0.0e+00 |
| WP_095933025.1 | carbamoyl-phosphate synthase large subunit [Streptomyces sp....
| 5461 | 0.0e+00 |
| WP_060902392.1 | carbamoyl-phosphate synthase large subunit [Streptomyces sp....
| 5460 | 0.0e+00 |
| WP_075027541.1 | carbamoyl-phosphate synthase large subunit [Streptomyces mir...
| 5460 | 0.0e+00 |
| WP_055613851.1 | carbamoyl-phosphate synthase large subunit [Streptomyces pha...
| 5459 | 0.0e+00 |
| WP_028803686.1 | carbamoyl-phosphate synthase large subunit [Streptomyces sp....
| 5459 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| outside | 0.3000 | Seems to have a cleavable N-term signal seq.
|