| ID | SAVERM_6869
| Type | CDS
|
| From | 8198744
| nt length | 843
|
| To | 8199586
| aa length | 280
|
| Gene | pyrF
| pI | 4.78
|
| Definition | putative orotidine 5’-phosphate decarboxylase
| M.W (Da) | 28932
|
| Note | PF00215: Orotidine 5'-phosphate decarboxylase / HUMPS family
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of nucleotides & nucleic acids
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1481 orotidine 5'-phosphate decarboxylase | 491 | 1.0e-178
|
| sgr | SGR_6053 putative orotidine 5'-phosphate decarboxylase | 399 | 2.0e-142
|
| sam | SAM23877_1533 Orotidine 5'-phosphate decarboxylase | 491 | 7.0e-179
|
| scab | SCAB75251 putative orotidine 5'-phosphate decarboxylase | 474 | 5.0e-172
|
| sace | SACE_2084 orotidine-5prime-phosphate decarboxylase | 293 | 9.0e-101
|
| nfar | nfa36180 pyrF orotidine 5'-phosphate decarboxylase | 286 | 1.1e-78
|
| mtub | gi|15608524 orotidine 5'-phosphate decarboxylase [Mycobacterium tuberculosis H37Rv] | 244 | 6.1e-66
|
| cglu | gi|19552820 COG0284:Orotidine-5'-phosphate decarboxylase [Corynebacterium glutamicum] | 241 | 2.8e-65
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| OMPdecase | 1 | Orotidine 5'-phosphate decarboxylase / HUMPS family | 19-263 | 128.0 | 3.6e-37
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| MYT02409.1 | orotidine-5'-phosphate decarboxylase [Streptomyces sp. SID5469]
| 1302 | 1.2e-180 |
| WP_179857169.1 | orotidine-5'-phosphate decarboxylase [Streptomyces sp. OV198...
| 1205 | 8.1e-166 |
| WP_218513510.1 | orotidine-5'-phosphate decarboxylase [Streptomyces sp. TRM70...
| 1204 | 9.9e-166 |
| WP_179436642.1 | orotidine-5'-phosphate decarboxylase [Streptomyces sp. Ag82_...
| 1203 | 1.7e-165 |
| WP_054233982.1 | MULTISPECIES: orotidine-5'-phosphate decarboxylase [Streptom...
| 1201 | 3.2e-165 |
| WP_181651936.1 | orotidine-5'-phosphate decarboxylase [Streptomyces sp. WAC00...
| 1200 | 4.1e-165 |
| WP_168490021.1 | MULTISPECIES: orotidine-5'-phosphate decarboxylase [Streptom...
| 1198 | 8.4e-165 |
| WP_235458607.1 | orotidine-5'-phosphate decarboxylase [Streptomyces olivochro...
| 1196 | 1.8e-164 |
| WP_164405945.1 | MULTISPECIES: orotidine-5'-phosphate decarboxylase [unclassi...
| 1195 | 2.1e-164 |
| QIY94681.1 | orotidine-5'-phosphate decarboxylase [Streptomyces sp. S1D4-11]
| 1195 | 2.5e-164 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2040 | Seems to have no N-terminal signal seq.
|