| ID | SAVERM_6870
| Type | CDS
|
| From | 8199842
| nt length | 324
|
| To | 8200165
| aa length | 107
|
| Gene |
| pI | 11.15
|
| Definition | putative nucleoid-binding protein
| M.W (Da) | 11539
|
| Note | PF00416: Ribosomal protein S13/S18
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1480 conserved hypothetical protein | 206 | 2.0e-71
|
| sgr | SGR_6054 putative integration host factor | 201 | 8.0e-70
|
| sam | SAM23877_1532 hypothetical protein | 206 | 2.0e-71
|
| scab | SCAB75261 putative integration host factor | 206 | 2.0e-71
|
| sace | SACE_2099 putative integration host factor | 98 | 9.0e-29
|
| nfar | nfa36170 integration host factor | 115 | 5.3e-28
|
| mtub | gi|15608527 PUTATIVE INTEGRATION HOST FACTOR MIHF [Mycobacterium tuberculosis H37Rv] | 123 | 3.0e-30
|
| cglu | gi|19552819 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 115 | 3.5e-28
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
no hits.
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2275 | Seems to have no N-terminal signal seq.
|