| ID | SAVERM_6877
| Type | CDS
|
| From | 8207585
| nt length | 933
|
| To | 8208517
| aa length | 310
|
| Gene | fmt
| pI | 6.05
|
| Definition | putative methionyl-tRNA formyltransferase
| M.W (Da) | 32763
|
| Note | PF00551: Formyl transferase
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | initiation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1473 methionyl-tRNA formyltransferase | 531 | 0.0e+00
|
| sgr | SGR_6061 putative methionyl-tRNA formyltransferase | 523 | 0.0e+00
|
| sam | SAM23877_1525 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase | 534 | 0.0e+00
|
| scab | SCAB75341 putative methionyl-tRNA formyltransferase | 562 | 0.0e+00
|
| sace | SACE_2113 methionyl-tRNA formyltransferase | 385 | 5.0e-136
|
| nfar | nfa36080 fmt methionyl-tRNA formyltransferase | 374 | 5.8e-105
|
| mtub | gi|15608544 methionyl-tRNA formyltransferase [Mycobacterium tuberculosis H37Rv] | 333 | 1.1e-92
|
| cglu | gi|19552812 COG0223:Methionyl-tRNA formyltransferase [Corynebacterium glutamicum] | 309 | 1.2e-85
|
| bsub | BG11937 fmt, yloL; methionyl-tRNA formyltransferase [EC:2.1.2.9] | 193 | 1.2e-50
|
| ecoli | gi|16131167 methionyl-tRNA formyltransferase [Escherichia coli K12] | 218 | 5.3e-58
|
| paer | PA0018 [gene=fmt] [prot=methionyl-tRNA formyltransferase] [comment=PA0018] | 191 | 5.6e-50
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Formyl_trans_N | 1 | Formyl transferase | 2-179 | 113.8 | 7e-33
|
| Formyl_trans_C | 1 | Formyl transferase, C-terminal domain | 204-300 | 86.9 | 8.1e-25
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_189772818.1 | methionyl-tRNA formyltransferase [Streptomyces tauricus] >db...
| 1498 | 0.0e+00 |
| WP_055518071.1 | methionyl-tRNA formyltransferase [Streptomyces aurantiacus]
| 1495 | 0.0e+00 |
| WP_054236824.1 | MULTISPECIES: methionyl-tRNA formyltransferase [unclassified...
| 1490 | 0.0e+00 |
| WP_107019658.1 | methionyl-tRNA formyltransferase [Streptomyces dioscori] >gb...
| 1489 | 0.0e+00 |
|
| 1488 | 0.0e+00 |
| WP_190173396.1 | MULTISPECIES: methionyl-tRNA formyltransferase [Streptomyces...
| 1488 | 0.0e+00 |
| WP_164314988.1 | methionyl-tRNA formyltransferase [Streptomyces sp. SID12501]...
| 1487 | 0.0e+00 |
| WP_153291689.1 | methionyl-tRNA formyltransferase [Streptomyces fagopyri] >gb...
| 1486 | 0.0e+00 |
| WP_210891792.1 | methionyl-tRNA formyltransferase [Streptomyces sp. BH-SS-21]...
| 1486 | 0.0e+00 |
| WP_164408608.1 | methionyl-tRNA formyltransferase [Streptomyces sp. SID12488]...
| 1485 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0540 | Seems to have no N-terminal signal seq.
|