| ID | SAVERM_6878
| Type | CDS
|
| From | 8209360
| nt length | 1431
|
| To | 8210790
| aa length | 476
|
| Gene | sun
| pI | 6.71
|
| Definition | putative RNA-binding Sun protein
| M.W (Da) | 51031
|
| Note | PF01189: NOL1/NOP2/sun family
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | RNA modification
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1472 hypothetical protein | 766 | 0.0e+00
|
| sgr | SGR_6062 putative RNA-binding Sun protein | 726 | 0.0e+00
|
| sam | SAM23877_1524 putative rRNA cytosine-C5-methyltransferase | 765 | 0.0e+00
|
| scab | SCAB75351 putative RNA-binding Sun protein | 753 | 0.0e+00
|
| sace | SACE_2114 ribosomal RNA small subunit methyltransferase | 383 | 1.0e-130
|
| nfar | nfa36070 sun RNA-binding Sun protein | 461 | 8.0e-131
|
| mtub | gi|15608545 PROBABLE FMU PROTEIN (SUN PROTEIN) [Mycobacterium tuberculosis H37Rv] | 444 | 6.0e-126
|
| cglu | gi|19552811 COG0144:tRNA and rRNA cytosine-C5-methylases [Corynebacterium glutamicum] | 358 | 2.3e-100
|
| bsub | BG12253 yloM, sun; similar to RNA-binding Sun protein. function is unknown | 180 | 1.4e-46
|
| ecoli | gi|16131168 16S rRNA m5C967 methyltransferase [Escherichia coli K12] | 143 | 2.8e-35
|
| paer | PA0017 [gene=PA0017] [prot=conserved hypothetical protein] [comment=PA0017] | 162 | 6.2e-41
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Methyltr_RsmB-F | 1 | 16S rRNA methyltransferase RsmB/F | 284-472 | 151.3 | 2.3e-44
|
| NusB | 1 | NusB family | 23-148 | 90.1 | 1.3e-25
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_189188049.1 | rRNA cytosine-C5-methyltransferase [Streptomyces albiflavesc...
| 2111 | 0.0e+00 |
| WP_153291690.1 | rRNA cytosine-C5-methyltransferase [Streptomyces fagopyri] >...
| 2106 | 0.0e+00 |
| WP_189839861.1 | rRNA cytosine-C5-methyltransferase [Streptomyces umbrinus] >...
| 2096 | 0.0e+00 |
| WP_143635348.1 | rRNA cytosine-C5-methyltransferase [Streptomyces sp. IB20169...
| 2089 | 0.0e+00 |
| WP_190229276.1 | rRNA cytosine-C5-methyltransferase [Streptomyces umbrinus] >...
| 2088 | 0.0e+00 |
| WP_028803676.1 | MULTISPECIES: rRNA cytosine-C5-methyltransferase [unclassifi...
| 2083 | 0.0e+00 |
| WP_067366065.1 | rRNA cytosine-C5-methyltransferase [Streptomyces olivochromo...
| 2082 | 0.0e+00 |
| WP_055618143.1 | rRNA cytosine-C5-methyltransferase [Streptomyces phaeochromo...
| 2079 | 0.0e+00 |
| WP_075027533.1 | rRNA cytosine-C5-methyltransferase [Streptomyces mirabilis] ...
| 2079 | 0.0e+00 |
| QIY94672.1 | rRNA cytosine-C5-methyltransferase [Streptomyces sp. S1D4-11]
| 2076 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2886 | Seems to have no N-terminal signal seq.
|