| ID | SAVERM_6926
| Type | CDS
|
| From | 8263360
| nt length | 1347
|
| To | 8262014
| aa length | 448
|
| Gene |
| pI | 9.6
|
| Definition | putative transmembrane efflux protein
| M.W (Da) | 47876
|
| Note | PF07690: Major Facilitator Superfamily
| AseI frg. | T
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1420 putative integral membrane protein | 707 | 0.0e+00
|
| sgr | SGR_6112 putative permease of the major facilitator superfamily | 654 | 0.0e+00
|
| sam | SAM23877_1480 putative transmembrane efflux protein | 729 | 0.0e+00
|
| scab | SCAB75851 putative transmembrane efflux protein | 758 | 0.0e+00
|
| sace | SACE_2291 putative integral membrane protein | 397 | 4.0e-136
|
| nfar | nfa12920 transporter | 154 | 1.5e-38
|
| mtub | gi|15609645 PROBABLE CONSERVED INTEGRAL MEMBRANE LEUCINE AND ALANINE RICH PROTEIN [Mycobacterium tuberculosis H37Rv] | 136 | 2.5e-33
|
| cglu | gi|19553812 COG2270:Permeases of the major facilitator superfamily [Corynebacterium glutamicum] | 138 | 4.6e-34
|
| bsub | BG11144 yxiO, s3AR; probable transporter | 209 | 2.0e-55
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ATG22 | 1 | Vacuole effluxer Atg22 like | 17-440 | 303.0 | 3.1e-90
|
| MFS_1 | 1 | Major Facilitator Superfamily | 279-434 | 63.6 | 1.4e-17
|
| MFS_2 | 1 | MFS/sugar transport protein | 35-407 | 44.6 | 6.7e-12
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5861 | Seems to have no N-terminal signal seq.
|