| ID | SAVERM_6939
| Type | CDS
|
| From | 8276400
| nt length | 753
|
| To | 8275648
| aa length | 250
|
| Gene |
| pI | 5.7
|
| Definition | putative lactam utilization protein
| M.W (Da) | 26376
|
| Note | PF03746: LamB/YcsF family
| AseI frg. | T
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | detoxification
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO0441 hypothetical protein | 357 | 1.0e-126
|
| sgr | SGR_3193 conserved hypothetical protein | 338 | 3.0e-119
|
| sam | SAM23877_7047 putative lactam utilization protein, UPF0271 family | 352 | 1.0e-124
|
| scab | SCAB75981 hypothetical protein | 396 | 5.0e-142
|
| sace | SACE_1550 LamB/YcsF | 296 | 8.0e-103
|
| nfar | nfa56540 lactam utilization protein | 265 | 2.2e-72
|
| mtub | gi|15609412 hypothetical protein Rv2275 [Mycobacterium tuberculosis H37Rv] | 33 | 1.8e-02
|
| cglu | gi|19552227 COG1540:Uncharacterized proteins, homologs of lactam utilization protein B [Corynebacterium glutamicum] | 230 | 5.5e-62
|
| bsub | BG11227 ycsF; similar to lactam utilization protein | 211 | 2.5e-56
|
| ecoli | gi|16128688 hypothetical protein b0713 [Escherichia coli K12] | 196 | 1.2e-51
|
| paer | PA4511 [gene=PA4511] [prot=conserved hypothetical protein] [comment=PA4511] | 215 | 2.7e-57
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| LamB_YcsF | 1 | LamB/YcsF family | 2-240 | 334.5 | 3.5e-100
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2617 | Seems to have no N-terminal signal seq.
|