| ID | SAVERM_6941
| Type | CDS
|
| From | 8278553
| nt length | 1320
|
| To | 8277234
| aa length | 439
|
| Gene |
| pI | 9.55
|
| Definition | putative transmembrane efflux protein
| M.W (Da) | 45882
|
| Note | PF07690: Major Facilitator Superfamily
| AseI frg. | T
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1411 putative transmembrane transport protein | 728 | 0.0e+00
|
| sam | SAM23877_1469 putative transmembrane transport protein | 734 | 0.0e+00
|
| scab | SCAB76001 putative transmembrane efflux protein | 714 | 0.0e+00
|
| mtub | gi|15609039 PROBABLE SIALIC ACID-TRANSPORT INTEGRAL MEMBRANE PROTEIN NANT [Mycobacterium tuberculosis H37Rv] | 164 | 8.3e-42
|
| bsub | BG12773 yceI; similar to transporter | 147 | 1.6e-36
|
| ecoli | gi|49176328 putative sialic acid transporter [Escherichia coli K12] | 152 | 3.2e-38
|
| paer | PA2114 [gene=PA2114] [prot=probable MFS transporter] [comment=PA2114] | 412 | 2.4e-116
|
*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| MFS_1 | 1 | Major Facilitator Superfamily | 46-396 | 160.0 | 6.8e-47
|
| Sugar_tr | 1 | Sugar (and other) transporter | 73-223 | 125.9 | 1.8e-36
|
| MFS_5 | 1 | Sugar-tranasporters, 12 TM | 64-212 | 35.4 | 5.2e-09
|
| LacY_symp | 1 | LacY proton/sugar symporter | 59-222 | 26.6 | 2.2e-06
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4185 | Seems to have no N-terminal signal seq.
|