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IDSAVERM_6946 TypeCDS
From8288540 nt length1551
To8286990 aa length516
Gene pI5.25
Definitionputative choline oxidase M.W (Da)56447
NotePF00732: GMC oxidoreductase AseI frg.T
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
sgrSGR_1535 putative GMC-family oxidoreductase8250.0e+00
scabSCAB76051 putative choline oxidase9990.0e+00
saceSACE_5373 glucose-methanol-choline oxidoreductase7920.0e+00
nfarnfa27850 oxidoreductase2457.6e-66
ecoligi|16128296 choline dehydrogenase [Escherichia coli K12]2956.4e-81
paerPA5372 [gene=betA] [prot=choline dehydrogenase] [comment=PA5372]3017.2e-83

*sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GMC_oxred_N1GMC oxidoreductase6-300247.41.8e-73

GMC_oxred_C1GMC oxidoreductase371-508136.86.6e-40

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_217566290.1 GMC family oxidoreductase N-terminal domain-containing prote... 24420.0e+00
WP_099500442.1 MULTISPECIES: GMC family oxidoreductase N-terminal domain-co... 24400.0e+00
WP_095855863.1 MULTISPECIES: GMC family oxidoreductase N-terminal domain-co... 24340.0e+00
WP_095932953.1 GMC family oxidoreductase N-terminal domain-containing prote... 24310.0e+00
WP_190173439.1 GMC family oxidoreductase N-terminal domain-containing prote... 24290.0e+00
WP_055492957.1 GMC family oxidoreductase N-terminal domain-containing prote... 24280.0e+00
WP_067366248.1 GMC family oxidoreductase N-terminal domain-containing prote... 24250.0e+00
WP_168527110.1 GMC family oxidoreductase N-terminal domain-containing prote... 24240.0e+00
WP_028803605.1 GMC family oxidoreductase N-terminal domain-containing prote... 24230.0e+00
WP_148007895.1 GMC family oxidoreductase N-terminal domain-containing prote... 24170.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1198 Seems to have no N-terminal signal seq.