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IDSAVERM_6979 TypeCDS
From8338127 nt length333
To8338459 aa length110
Gene pI9.25
Definitionputative membrane protein M.W (Da)11380
NotePF06947: Protein of unknown function (DUF1290) AseI frg.D
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO1386 putative integral membrane protein2004.0e-69
sgrSGR_6143 putative membrane protein1961.0e-67
samSAM23877_1444 conserved membrane protein of unknown function2003.0e-69
scabSCAB76251 putative membrane protein2013.0e-69
mtubgi|15608961 hypothetical protein Rv1824 [Mycobacterium tuberculosis H37Rv]1511.1e-38
bsubBG10230 sbp; small basic protein894.6e-20

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF12901Protein of unknown function (DUF1290)21-108118.31e-34

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_225839013.1 small basic family protein [Streptomyces sp. NK08204] 3712.6e-44
WP_006134295.1 MULTISPECIES: small basic family protein [Streptomyces] >gb 3712.6e-44
3712.8e-44
WP_009343209.1 MULTISPECIES: small basic family protein [Streptomyces] >lcl... 3713.1e-44
WP_033327114.1 MULTISPECIES: small basic family protein [Streptomyces] >dbj... 3713.1e-44
WP_156700690.1 MULTISPECIES: small basic family protein [Streptomyces] 3704.1e-44
WP_196790465.1 MULTISPECIES: small basic family protein [Streptomyces] 3694.5e-44
WP_206344634.1 DUF1290 domain-containing protein [Streptomyces mesophilus] 3694.7e-44
NGO81018.1 small basic family protein [Streptomyces mesophilus] 3695.2e-44
EGJ78747.1 hypothetical protein STTU_5958 [Streptomyces sp. Tu6071] 3695.2e-44

PSORT result

LocalizationCertaintyPSORT said
membrane0.4970 Seems to have a cleavable N-term signal seq.