| ID | SAVERM_7061
| Type | CDS
|
| From | 8422057
| nt length | 465
|
| To | 8421593
| aa length | 154
|
| Gene |
| pI | 9.94
|
| Definition | putative AsnC-family transcriptional regulator
| M.W (Da) | 17191
|
| Note | PF01037: AsnC family
| AseI frg. | D
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1295 putative AsnC-family transcriptional regulatory protein | 268 | 3.0e-94
|
| sgr | SGR_6255 putative AsnC-family transcriptional regulator | 252 | 3.0e-88
|
| sam | SAM23877_1374 putative AsnC-family transcriptional regulatory protein | 261 | 7.0e-92
|
| scab | SCAB77931 putative AsnC-family transcriptional regulator | 271 | 9.0e-96
|
| sace | SACE_5717 transcriptional regulator, AsnC family | 120 | 3.0e-36
|
| mtub | gi|57117025 POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY LRP/ASNC-FAMILY) [Mycobacterium tuberculosis H37Rv] | 96 | 8.3e-22
|
| cglu | gi|19553854 COG1522:Transcriptional regulators [Corynebacterium glutamicum] | 131 | 1.3e-32
|
| bsub | BG11914 azlB, yrdG; repressor of the azlBCD operon (Lrp family) | 77 | 4.6e-16
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| AsnC_trans_reg | 1 | Lrp/AsnC ligand binding domain | 62-133 | 58.9 | 3.3e-16
|
| HTH_24 | 1 | Winged helix-turn-helix DNA-binding | 2-40 | 47.1 | 1.2e-12
|
| HTH_AsnC-type | 1 | AsnC-type helix-turn-helix domain | 2-35 | 45.9 | 3.4e-12
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_148007984.1 | Lrp/AsnC family transcriptional regulator [Streptomyces sp. ...
| 750 | 1.7e-100 |
| WP_153291844.1 | Lrp/AsnC family transcriptional regulator [Streptomyces fago...
| 749 | 3.1e-100 |
| WP_168527015.1 | Lrp/AsnC family transcriptional regulator [Streptomyces sp. ...
| 745 | 1.0e-99 |
| WP_081223168.1 | MULTISPECIES: Lrp/AsnC family transcriptional regulator [unc...
| 741 | 5.1e-99 |
| WP_007496234.1 | Lrp/AsnC family transcriptional regulator [Streptomyces zinc...
| 738 | 1.4e-98 |
| WP_234762563.1 | Lrp/AsnC family transcriptional regulator [Streptomyces muen...
| 735 | 3.2e-98 |
|
| 734 | 4.8e-98 |
| WP_222108943.1 | Lrp/AsnC family transcriptional regulator [Streptomyces sp. ...
| 731 | 9.3e-98 |
| WP_048584995.1 | Lrp/AsnC family transcriptional regulator [Streptomyces viri...
| 732 | 1.1e-97 |
| WP_151470566.1 | Lrp/AsnC family transcriptional regulator [Streptomyces trit...
| 732 | 1.2e-97 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1460 | Seems to have no N-terminal signal seq.
|