-- | --

IDSAVERM_7074 TypeCDS
From8437097 nt length723
To8437819 aa length240
Gene pI6.52
Definitionputative ABC transporter permease protein M.W (Da)24496
NotePF01061: ABC-2 type transporter AseI frg.D
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO1257 putative ABC transport system integral membrane protein2334.0e-78
sgrSGR_6270 putative ABC transporter permease protein1653.0e-51
samSAM23877_1344 putative ABC transport system integral membrane protein2105.0e-69
nfarnfa46930 ABC transporter membrane protein692.2e-13
ecoligi|16129876 putative membrane component of transport system [Escherichia coli K12]315.0e-02

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; nfar, Nocardia farcinica IFM 10152; ecoli, Escherichia coli K-12;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_141572420.1 ABC transporter permease [Streptomyces ipomoeae] >lcl 7698.7e-101
WP_009326817.1 putative membrane protein [Streptomyces ipomoeae] >gb 7621.1e-99
WP_165263807.1 ABC transporter permease [Streptomyces scabichelini] >gb 7611.7e-99
WP_123963674.1 ABC transporter permease subunit [Streptomyces sp. TLI_185] ... 7491.0e-97
WP_055610846.1 ABC transporter permease [Streptomyces phaeochromogenes] 7421.3e-96
WP_037704893.1 ABC transporter permease [Streptomyces scabiei] >gb 7342.0e-95
WP_086748329.1 ABC transporter permease [Streptomyces scabiei] 7314.9e-95
WP_143644235.1 ABC transporter permease [Streptomyces sp. IB201691-2A2] >lc... 7315.1e-95
WP_217567334.1 ABC transporter permease subunit [Streptomyces sp. GbtcB7] 7308.3e-95
WP_129796645.1 ABC transporter permease subunit [Streptomyces sp. F001] >gb... 7308.5e-95

PSORT result

LocalizationCertaintyPSORT said
membrane0.4673 Seems to have a cleavable N-term signal seq.