| ID | SAVERM_7091
| Type | CDS
|
| From | 8454701
| nt length | 717
|
| To | 8453985
| aa length | 238
|
| Gene | bioD
| pI | 4.75
|
| Definition | putative dethiobiotin synthetase
| M.W (Da) | 23768
|
| Note | PF01656: CobQ/CobB/MinD/ParA nucleotide binding domain
| AseI frg. | D
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of coenzymes & prosthetic groups
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1246 dethiobiotin synthetase | 304 | 4.0e-106
|
| sgr | SGR_6280 putative dethiobiotin synthetase | 270 | 7.0e-93
|
| sam | SAM23877_1335 ATP-dependent dethiobiotin synthetase BioD | 304 | 3.0e-106
|
| scab | SCAB78211 putative dethiobiotin synthetase | 320 | 2.0e-112
|
| sace | SACE_0978 dethiobiotin synthetase | 258 | 5.0e-88
|
| nfar | nfa18200 bioD dethiobiotin synthetase | 236 | 1.7e-63
|
| mtub | gi|15608708 dithiobiotin synthetase [Mycobacterium tuberculosis H37Rv] | 160 | 5.4e-41
|
| cglu | gi|19553804 COG0132:Dethiobiotin synthetase [Corynebacterium glutamicum] | 142 | 1.9e-35
|
| bsub | BG11526 bioD; dethiobiotin synthetase [EC:6.3.3.3] | 87 | 5.1e-19
|
| ecoli | gi|16128746 dithiobiotin synthetase [Escherichia coli K12] | 71 | 5.6e-14
|
| paer | PA0504 [gene=bioD] [prot=dethiobiotin synthase] [comment=PA0504] | 80 | 1.6e-16
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| AAA_26 | 1 | AAA domain | 4-201 | 104.7 | 4.9e-30
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.2402 | Seems to have no N-terminal signal seq.
|