| ID | SAVERM_7093
| Type | CDS
|
| From | 8457151
| nt length | 1167
|
| To | 8455985
| aa length | 388
|
| Gene | bioB
| pI | 4.84
|
| Definition | putative biotin synthase
| M.W (Da) | 41213
|
| Note | PF06968: Biotin and Thiamin Synthesis associated domain
| AseI frg. | D
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of coenzymes & prosthetic groups
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1244 biotin synthase | 671 | 0.0e+00
|
| sgr | SGR_6282 putative biotin synthase | 639 | 0.0e+00
|
| sam | SAM23877_1333 Biotin synthase | 654 | 0.0e+00
|
| scab | SCAB78231 putative biotin synthase | 681 | 0.0e+00
|
| sace | SACE_4683 biotin synthase | 437 | 1.0e-154
|
| nfar | nfa18320 bioB biotin synthase | 194 | 1.4e-50
|
| mtub | gi|15608727 biotin synthase [Mycobacterium tuberculosis H37Rv] | 194 | 6.4e-51
|
| cglu | gi|19551322 COG0502:Biotin synthase and related enzymes [Corynebacterium glutamicum] | 192 | 1.7e-50
|
| bsub | BG11525 bioB; biotin synthetase [EC:2.8.1.6] | 317 | 5.8e-88
|
| ecoli | gi|16128743 biotin synthesis, sulfur insertion? [Escherichia coli K12] | 184 | 6.6e-48
|
| paer | PA0500 [gene=bioB] [prot=biotin synthase] [comment=PA0500] | 191 | 9.7e-50
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| BATS | 1 | Biotin and Thiamin Synthesis associated domain | 232-321 | 54.7 | 7.7e-15
|
| Radical_SAM | 1 | Radical SAM superfamily | 65-219 | 54.1 | 2.2e-14
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1385 | Seems to have no N-terminal signal seq.
|