| ID | SAVERM_7125
| Type | CDS
|
| From | 8486755
| nt length | 1239
|
| To | 8485517
| aa length | 412
|
| Gene |
| pI | 7.08
|
| Definition | putative ligase
| M.W (Da) | 43738
|
| Note | PF01225: Mur ligase family, catalytic domain
| AseI frg. | D
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1212 putative ligase | 723 | 0.0e+00
|
| sgr | SGR_6308 putative ligase | 718 | 0.0e+00
|
| sam | SAM23877_1292 putative ligase | 737 | 0.0e+00
|
| scab | SCAB78601 putative ligase | 697 | 0.0e+00
|
| sace | SACE_3574 probable UDP-N-acetylmuramoylalanine--D-glutamate ligase | 285 | 5.0e-93
|
| nfar | nfa3020 hypothetical protein | 333 | 1.6e-92
|
| mtub | gi|15610848 POSSIBLE LIGASE [Mycobacterium tuberculosis H37Rv] | 332 | 2.1e-92
|
| cglu | gi|19551497 COG0769:UDP-N-acetylmuramyl tripeptide synthase [Corynebacterium glutamicum] | 313 | 7.2e-87
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF1727 | 1 | Domain of unknown function (DUF1727) | 304-403 | 78.0 | 4.4e-22
|
| Mur_ligase_M | 1 | Mur ligase middle domain | 65-266 | 50.9 | 1.8e-13
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_107018927.1 | MULTISPECIES: MurT ligase domain-containing protein [Strepto...
| 1847 | 0.0e+00 |
| WP_189184374.1 | MurT ligase domain-containing protein [Streptomyces albiflav...
| 1844 | 0.0e+00 |
| WP_221350161.1 | MurT ligase domain-containing protein [Streptomyces sp. REN1...
| 1844 | 0.0e+00 |
| WP_189774304.1 | MurT ligase domain-containing protein [Streptomyces tauricus...
| 1844 | 0.0e+00 |
| WP_033325013.1 | MurT ligase domain-containing protein [Streptomyces yerevane...
| 1843 | 0.0e+00 |
| WP_171107499.1 | MULTISPECIES: MurT ligase domain-containing protein [Strepto...
| 1841 | 0.0e+00 |
| WP_217459561.1 | MurT ligase domain-containing protein [Streptomyces sp. BV28...
| 1840 | 0.0e+00 |
| WP_141310227.1 | MurT ligase domain-containing protein [Streptomyces spinover...
| 1839 | 0.0e+00 |
| WP_165264164.1 | MurT ligase domain-containing protein [Streptomyces scabiche...
| 1839 | 0.0e+00 |
| WP_119103844.1 | MurT ligase domain-containing protein [Streptomyces sporangi...
| 1839 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1678 | Seems to have no N-terminal signal seq.
|