| ID | SAVERM_7126
| Type | CDS
|
| From | 8486898
| nt length | 561
|
| To | 8487458
| aa length | 186
|
| Gene | def2
| pI | 6.41
|
| Definition | putative polypeptide deformylase
| M.W (Da) | 20511
|
| Note | PF01327: Polypeptide deformylase
| AseI frg. | D
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of amino acids & related molecules
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1211 putative polypeptide deformylase | 284 | 1.0e-99
|
| sgr | SGR_6309 putative polypeptide deformylase | 265 | 3.0e-92
|
| sam | SAM23877_1291 Peptide deformylase 2 | 293 | 2.0e-103
|
| scab | SCAB78621 putative polypeptide deformylase | 262 | 1.0e-91
|
| nfar | nfa53010 polypeptide deformylase | 152 | 1.7e-38
|
| bsub | BG11933 def, yloK; polypeptide deformylase (formylmethionine deformylase) [EC:3.5.1.31] | 95 | 1.3e-21
|
| ecoli | gi|16131166 peptide deformylase [Escherichia coli K12] | 102 | 2.1e-23
|
| paer | PA0019 [gene=def] [prot=polypeptide deformylase] [comment=PA0019] | 98 | 4.0e-22
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Pep_deformylase | 1 | Polypeptide deformylase | 15-162 | 148.1 | 1.4e-43
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_168489785.1 | MULTISPECIES: peptide deformylase [Streptomyces] >gb
| 814 | 1.8e-109 |
| WP_060902470.1 | peptide deformylase [Streptomyces sp. WAC00263]
| 813 | 2.5e-109 |
| WP_179436656.1 | MULTISPECIES: peptide deformylase [unclassified Streptomyces...
| 813 | 2.8e-109 |
|
| 814 | 5.5e-109 |
| WP_067378669.1 | peptide deformylase [Streptomyces olivochromogenes] >gb
| 811 | 6.0e-109 |
| WP_164331655.1 | MULTISPECIES: peptide deformylase [unclassified Streptomyces...
| 810 | 7.7e-109 |
| WP_153291898.1 | peptide deformylase [Streptomyces fagopyri] >gb
| 808 | 1.6e-108 |
| QDN96865.1 | peptide deformylase [Streptomyces sp. RLB1-9] >gb
| 811 | 1.7e-108 |
| WP_075025355.1 | peptide deformylase [Streptomyces mirabilis] >emb
| 808 | 1.8e-108 |
| OIK01393.1 | peptide deformylase [Streptomyces colonosanans]
| 808 | 2.3e-108 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0615 | Seems to have no N-terminal signal seq.
|