-- | --

IDSAVERM_7158 TypeCDS
From8518263 nt length933
To8519195 aa length310
GeneprsR pI5.37
Definitionputative regulator of sigma factor M.W (Da)33066
NotePF02518: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AseI frg.D
SignalP v.4.0Non-secretory protein | plot CategoryRNA initiation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO0599 putative regulator of sig83942.0e-139
samSAM23877_6931 putative anti-sigma factor, regulator of HasL and HasR3857.0e-136
scabSCAB87131 putative anti-sigma factor4094.0e-145
saceSACE_4200 regulator of sigma factor3383.0e-117
nfarnfa18850 hypothetical protein3621.8e-101
ecoligi|16131430 glycyl-tRNA synthetase beta subunit [Escherichia coli K12]319.2e-02

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; ecoli, Escherichia coli K-12;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MEDS1MEDS: MEthanogen/methylotroph, DcmR Sensory domain13-156117.44.9e-34

HATPase_c_21Histidine kinase-like ATPase domain195-30550.22.1e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_206961388.1 ATP-binding protein [Streptomyces beijiangensis] >lcl 11467.7e-156
WP_138907144.1 MEDS domain-containing protein [Streptomyces chryseus] >dbj 11032.6e-149
WP_138896050.1 MEDS domain-containing protein [Streptomyces chryseus] >dbj 10998.7e-149
WP_069931990.1 MEDS domain-containing protein [Streptomyces agglomeratus] >... 10972.2e-148
WP_069935689.1 MEDS domain-containing protein [Streptomyces agglomeratus] >... 10962.4e-148
WP_203691567.1 sensor histidine kinase [Streptomyces sp. SID12488] 10953.7e-148
WP_069775019.1 MEDS domain-containing protein [Streptomyces agglomeratus] >... 10937.0e-148
WP_200711835.1 MULTISPECIES: MEDS domain-containing protein [unclassified S... 10808.2e-146
WP_093797212.1 sensor histidine kinase [Streptomyces sp. Wb2n-11] 10781.8e-145
WP_138905369.1 sensor histidine kinase [Streptomyces albidochromogenes] 10762.7e-145

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1550 Seems to have no N-terminal signal seq.