| ID | SAVERM_7200
| Type | CDS
|
| From | 8574316
| nt length | 846
|
| To | 8575161
| aa length | 281
|
| Gene | glpF3
| pI | 9.26
|
| Definition | putative glycerol uptake facilitator protein
| M.W (Da) | 29417
|
| Note | PF00230: Major intrinsic protein
| AseI frg. | D
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4057 putative transport integral membrane protein | 219 | 4.0e-71
|
| sgr | SGR_6421 putative glycerol uptake facilitator protein | 473 | 1.0e-171
|
| sam | SAM23877_7023 glycerol facilitator | 466 | 7.0e-169
|
| sace | SACE_4274 putative transport integral membrane protein | 224 | 4.0e-73
|
| nfar | nfa13970 aqpZ transmembrane water channel | 83 | 2.4e-17
|
| ecoli | gi|16131765 MIP channel, glycerol diffusion [Escherichia coli K12] | 175 | 3.5e-45
|
| paer | PA3581 [gene=glpF] [prot=glycerol uptake facilitator protein] [comment=PA3581] | 175 | 4.8e-45
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| MIP | 1 | Major intrinsic protein | 7-257 | 172.8 | 7.9e-51
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4482 | Seems to have a cleavable N-term signal seq.
|