| ID | SAVERM_7215
| Type | CDS
|
| From | 8596465
| nt length | 1176
|
| To | 8595290
| aa length | 391
|
| Gene |
| pI | 9.75
|
| Definition | putative integral membrane protein
| M.W (Da) | 41769
|
| Note | PF00924: Mechanosensitive ion channel
| AseI frg. | D
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO7001 putative integral membrane protein | 560 | 0.0e+00
|
| sam | SAM23877_6537 putative integral membrane protein | 536 | 0.0e+00
|
| scab | SCAB12191 putative membrane protein | 525 | 0.0e+00
|
| mtub | gi|15609571 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 68 | 9.1e-13
|
| bsub | BG13031 yhdY; similar to hypothetical proteins | 91 | 8.9e-20
|
| ecoli | gi|16130825 component of the MscS mechanosensitive channel [Escherichia coli K12] | 113 | 2.5e-26
|
| paer | PA4394 [gene=PA4394] [prot=conserved hypothetical protein] [comment=PA4394] | 98 | 8.7e-22
|
*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| MS_channel | 1 | Mechanosensitive ion channel | 148-352 | 161.9 | 1.4e-47
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_067304371.1 | mechanosensitive ion channel family protein [Streptomyces gr...
| 1237 | 1.4e-167 |
| WP_234516492.1 | mechanosensitive ion channel family protein [Streptomyces gl...
| 1236 | 2.5e-167 |
| WP_059126782.1 | mechanosensitive ion channel family protein [Streptomyces sp...
| 1235 | 3.2e-167 |
| WP_220295060.1 | mechanosensitive ion channel family protein [Streptomyces sp...
| 1226 | 8.7e-166 |
| WP_234531992.1 | mechanosensitive ion channel family protein [Streptomyces sh...
| 1225 | 1.1e-165 |
| WP_066990232.1 | mechanosensitive ion channel family protein [Streptomyces ce...
| 1224 | 1.4e-165 |
| WP_217553380.1 | mechanosensitive ion channel family protein [Streptomyces sp...
| 1219 | 9.4e-165 |
|
| 1216 | 2.2e-164 |
| WP_200421988.1 | mechanosensitive ion channel family protein [Streptomyces sp...
| 1216 | 2.4e-164 |
| WP_167444202.1 | mechanosensitive ion channel family protein [Streptomyces di...
| 1215 | 3.3e-164 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4376 | Seems to have no N-terminal signal seq.
|