| ID | SAVERM_7249
| Type | CDS
|
| From | 8643586
| nt length | 1440
|
| To | 8642147
| aa length | 479
|
| Gene | gnd3
| pI | 4.81
|
| Definition | putative 6-phosphogluconate dehydrogenase
| M.W (Da) | 51697
|
| Note | PF00393: 6-phosphogluconate dehydrogenase, C-terminal domain
| AseI frg. | D
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | main glycolytic pathways
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO0975 6-phosphogluconate 1-dehydrogenase | 862 | 0.0e+00
|
| sgr | SGR_769 putative 6-phosphogluconate dehydrogenase | 805 | 0.0e+00
|
| sam | SAM23877_6579 gluconate-6-phosphate dehydrogenase, decarboxylating | 863 | 0.0e+00
|
| scab | SCAB11811 putative 6-phosphogluconate dehydrogenase | 856 | 0.0e+00
|
| sace | SACE_4396 6-phosphogluconate dehydrogenase | 838 | 0.0e+00
|
| nfar | nfa11750 gnd 6-phosphogluconate dehydrogenase | 629 | 0.0e+00
|
| mtub | gi|57116925 6-phosphogluconate dehydrogenase [Mycobacterium tuberculosis H37Rv] | 616 | 1.2e-177
|
| cglu | gi|19552667 COG0362:6-phosphogluconate dehydrogenase, family 1 [Corynebacterium glutamicum] | 614 | 2.4e-177
|
| bsub | BG11738 yqjI; 6-phosphogluconate dehydrogenase [EC:1.1.1.44] | 503 | 9.5e-144
|
| ecoli | gi|16129970 6-phosphogluconate dehydrogenase [Escherichia coli K12] | 484 | 6.8e-138
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| 6PGD | 1 | 6-phosphogluconate dehydrogenase, C-terminal domain | 181-470 | 405.9 | 8.9e-122
|
| NAD_binding_2 | 1 | NAD binding domain of 6-phosphogluconate dehydrogenase | 6-176 | 168.3 | 1.3e-49
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_235456767.1 | NADP-dependent phosphogluconate dehydrogenase [Streptomyces ...
| 2274 | 0.0e+00 |
| WP_099501565.1 | MULTISPECIES: NADP-dependent phosphogluconate dehydrogenase ...
| 2273 | 0.0e+00 |
| WP_145877218.1 | NADP-dependent phosphogluconate dehydrogenase [Streptomyces ...
| 2271 | 0.0e+00 |
| WP_055468641.1 | NADP-dependent phosphogluconate dehydrogenase [Streptomyces ...
| 2270 | 0.0e+00 |
| WP_061925150.1 | NADP-dependent phosphogluconate dehydrogenase [Streptomyces ...
| 2269 | 0.0e+00 |
| WP_152893982.1 | NADP-dependent phosphogluconate dehydrogenase [Streptomyces ...
| 2266 | 0.0e+00 |
| WP_053762558.1 | NADP-dependent phosphogluconate dehydrogenase [Streptomyces ...
| 2265 | 0.0e+00 |
| WP_112438268.1 | NADP-dependent phosphogluconate dehydrogenase [Streptomyces ...
| 2264 | 0.0e+00 |
| WP_030404753.1 | MULTISPECIES: NADP-dependent phosphogluconate dehydrogenase ...
| 2262 | 0.0e+00 |
| WP_043670929.1 | NADP-dependent phosphogluconate dehydrogenase [Streptomyces ...
| 2261 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1065 | Seems to have an uncleavable N-term signal seq
|