| ID | SAVERM_7307
| Type | CDS
|
| From | 8715169
| nt length | 708
|
| To | 8715876
| aa length | 235
|
| Gene | sdhC2
| pI | 11.28
|
| Definition | putative succinate dehydrogenase cytochrome b-556 subunit (complex II)
| M.W (Da) | 25992
|
| Note | PF01127: Succinate dehydrogenase cytochrome b subunit
| AseI frg. | D
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | TCA cycle
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO0924 putative cytochrome B subunit | 410 | 3.0e-148
|
| sgr | SGR_707 putative cytochrome b subunit | 390 | 4.0e-140
|
| sam | SAM23877_6616 putative cytochrome B subunit | 386 | 7.0e-139
|
| scab | SCAB11481 putative succinate dehydrogenase iron-sulfur protein (complex II) | 365 | 1.0e-130
|
| cglu | gi|19551616 conserved hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 134 | 3.8e-33
|
| bsub | BG10351 sdhC; succinate dehydrogenase cytochrome b-556 subunit [EC:1.3.99.1] | 40 | 7.1e-05
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;
Pfam search result
no hits.
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4057 | Seems to have no N-terminal signal seq.
|