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IDSAVERM_7323 TypeCDS
From8735813 nt length1227
To8737039 aa length408
GeneavsD pI6.55
Definitionputative diaminopimelate decarboxylase M.W (Da)43504
Notesimilar to PvsE, PF02784: Pyridoxal-dependent decarboxylase, pyridoxal binding domain AseI frg.D
SignalP v.4.0Non-secretory protein | plot Categorymetabolism of amino acids & related molecules

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
scabSCAB84521 putative diaminopimelate decarboxylase6120.0e+00
saceSACE_1266 Orn/DAP/Arg decarboxylase 21004.0e-24

*scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Orn_Arg_deC_N1Pyridoxal-dependent decarboxylase, pyridoxal binding domain28-27997.57.3e-28

Orn_DAP_Arg_deC1Pyridoxal-dependent decarboxylase, C-terminal sheet domain23-37749.82.9e-13

Ala_racemase_N1Alanine racemase, N-terminal domain26-25430.52.4e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_217206816.1 type III PLP-dependent enzyme [Streptomyces sp. AC550_RSS872... 16010.0e+00
WP_126388266.1 type III PLP-dependent enzyme [Streptomyces cyaneochromogene... 15990.0e+00
WP_143633795.1 type III PLP-dependent enzyme [Streptomyces sp. IB201691-2A2... 15900.0e+00
WP_062720488.1 type III PLP-dependent enzyme [Streptomyces caeruleatus] >gb... 15830.0e+00
WP_214332752.1 type III PLP-dependent enzyme [Streptomyces sp. Tu102] >lcl 15790.0e+00
NUP14707.1 type III PLP-dependent enzyme [Streptomyces sp.] >gb 15780.0e+00
WP_217457483.1 type III PLP-dependent enzyme [Streptomyces sp. BV286] >lcl 15760.0e+00
WP_062714745.1 type III PLP-dependent enzyme [Streptomyces regalis] >gb 15750.0e+00
WP_079103716.1 type III PLP-dependent enzyme [Streptomyces aurantiacus] 15750.0e+00
WP_053748247.1 type III PLP-dependent enzyme [Streptomyces sp. MMG1533] >gb... 15740.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2095 Seems to have no N-terminal signal seq.