| ID | SAVERM_7343
| Type | CDS
|
| From | 8759059
| nt length | 456
|
| To | 8758604
| aa length | 151
|
| Gene |
| pI | 7.08
|
| Definition | hypothetical protein
| M.W (Da) | 17183
|
| Note | PF02452: PemK-like protein
| AseI frg. | D
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO0908 hypothetical protein | 257 | 3.0e-90
|
| sgr | SGR_693 conserved hypothetical protein | 219 | 2.0e-75
|
| sam | SAM23877_6632 hypothetical protein | 259 | 6.0e-91
|
| scab | SCAB11191 hypothetical protein | 275 | 3.0e-97
|
| nfar | nfa13980 hypothetical protein | 134 | 3.4e-33
|
| mtub | gi|15609542 hypothetical protein Rv2405 [Mycobacterium tuberculosis H37Rv] | 135 | 1.6e-33
|
| cglu | gi|19553541 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 98 | 1.2e-22
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| PemK_toxin | 1 | PemK-like, MazF-like toxin of type II toxin-antitoxin system | 46-145 | 39.4 | 5.9e-10
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_095938053.1 | type II toxin-antitoxin system PemK/MazF family toxin [Strep...
| 735 | 1.5e-98 |
| GHK04939.1 | mRNA interferase PemK [Streptomyces sp. Y2F8-2]
| 735 | 2.2e-98 |
| GGN57714.1 | mRNA interferase PemK [Streptomyces albiflavescens]
| 727 | 3.0e-97 |
| WP_119104219.1 | type II toxin-antitoxin system PemK/MazF family toxin [Strep...
| 725 | 6.6e-97 |
| WP_189185576.1 | type II toxin-antitoxin system PemK/MazF family toxin [Strep...
| 722 | 1.8e-96 |
| WP_234515892.1 | type II toxin-antitoxin system PemK/MazF family toxin [Strep...
| 722 | 1.8e-96 |
| WP_028798727.1 | type II toxin-antitoxin system PemK/MazF family toxin [Strep...
| 721 | 2.0e-96 |
|
| 721 | 2.2e-96 |
| WP_200422767.1 | type II toxin-antitoxin system PemK/MazF family toxin [Strep...
| 721 | 2.6e-96 |
| WP_121889004.1 | type II toxin-antitoxin system PemK/MazF family toxin [Strep...
| 720 | 3.8e-96 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.4358 | Seems to have no N-terminal signal seq.
|