| ID | SAVERM_7390
| Type | CDS
|
| From | 8818210
| nt length | 426
|
| To | 8817785
| aa length | 141
|
| Gene |
| pI | 7.07
|
| Definition | hypothetical protein
| M.W (Da) | 15013
|
| Note | PF02080: TrkA-C domain
| AseI frg. | D
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5783 hypothetical protein | 254 | 4.0e-89
|
| sgr | SGR_3817 conserved hypothetical protein | 125 | 3.0e-38
|
| sam | SAM23877_5487 putative regulatory protein | 250 | 1.0e-87
|
| scab | SCAB86211 hypothetical protein | 231 | 5.0e-80
|
| sace | SACE_5194 TrkA-C | 93 | 8.0e-26
|
| nfar | nfa37620 hypothetical protein | 100 | 3.7e-23
|
| mtub | gi|15610373 hypothetical protein Rv3237c [Mycobacterium tuberculosis H37Rv] | 85 | 1.6e-18
|
| bsub | BG12996 yhaT; similar to hypothetical proteins | 57 | 2.5e-10
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| TrkA_C | 1 | TrkA-C domain | 70-139 | 54.4 | 7.4e-15
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_210576838.1 | cation:proton antiporter regulatory subunit [Streptomyces sp...
| 632 | 7.5e-83 |
| WP_205615629.1 | cation:proton antiporter regulatory subunit [Streptomyces ha...
| 630 | 1.0e-82 |
| WP_029382755.1 | cation:proton antiporter regulatory subunit [Streptomyces le...
| 629 | 2.2e-82 |
| WP_044384634.1 | cation:proton antiporter regulatory subunit [Streptomyces cy...
| 628 | 3.3e-82 |
| NEY33467.1 | potassium transporter TrkA [Streptomyces harenosi]
| 628 | 3.3e-82 |
| WP_202458089.1 | cation:proton antiporter regulatory subunit [Streptomyces sp...
| 626 | 6.5e-82 |
| WP_010034803.1 | cation:proton antiporter regulatory subunit [Streptomyces ch...
| 625 | 9.0e-82 |
| QIY98671.1 | cation:proton antiporter regulatory subunit [Streptomyces sp. S1D...
| 623 | 1.9e-81 |
| WP_210589173.1 | cation:proton antiporter regulatory subunit [Streptomyces sp...
| 623 | 2.0e-81 |
| WP_189939468.1 | cation:proton antiporter regulatory subunit [Streptomyces au...
| 623 | 2.0e-81 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2678 | Seems to have no N-terminal signal seq.
|