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IDSAVERM_7400 TypeCDS
From8829444 nt length795
To8830238 aa length264
Genesig57 pI5.24
Definitionputative RNA polymerase sigma factor M.W (Da)29541
Notesimilar to SCO7341:sigG, RNA polymerase alternative sigma factor, PF04542: Sigma-70 region 2 AseI frg.D
SignalP v.4.0Non-secretory protein | plot CategoryRNA initiation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO7341 putative RNA polymerase secondary sigma factor3973.0e-142

*coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 242-11067.65.4e-19

Sigma70_r41Sigma-70, region 4209-25763.48.9e-18

Sigma70_r4_21Sigma-70, region 4209-24735.26.8e-09

Sigma70_r31Sigma-70 region 3121-17435.38.5e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_200423111.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 10969.7e-150
WP_103845014.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 10924.1e-149
WP_055495940.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 10881.6e-148
WP_059129671.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 10811.6e-147
10812.0e-147
WP_234517826.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 10802.2e-147
WP_043437719.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 10812.3e-147
WP_161238938.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 10779.3e-147
WP_217457596.1 RNA polymerase sigma factor SigF [Streptomyces sp. BV286] >l... 10736.4e-146
WP_220295648.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 10691.2e-145

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.3157 Seems to have no N-terminal signal seq.