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IDSAVERM_7516 TypeCDS
From8959792 nt length462
To8959331 aa length153
GenespdB3 pI9.8
Definitionputative mobile element transfer protein SpdB M.W (Da)16014
Note AseI frg.D
SignalP v.4.0Non-secretory protein | plot Categoryplasmid transfer

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
sgrSGR_3589 putative mobile element transfer protein822.0e-21
scabSCAB56131 putative mobile element transfer protein1001.0e-28

*sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_167998364.1 DUF5706 domain-containing protein [Streptomyces sp. SBST2-5]... 3672.7e-42
WP_023554056.1 DUF5706 domain-containing protein [Streptomyces roseochromog... 3647.5e-42
WP_086706744.1 DUF5706 domain-containing protein [Streptomyces antimycoticu... 3611.7e-41
WP_136319687.1 DUF5706 domain-containing protein [Streptomyces sp. A1277] >... 3593.7e-41
WP_069772192.1 DUF5706 domain-containing protein [Streptomyces sp. LUP30] 3585.6e-41
WP_124291201.1 DUF5706 domain-containing protein [Streptomyces sp. ADI91-18... 3579.0e-41
WP_200713729.1 DUF5706 domain-containing protein [Streptomyces sp. MBT62] >... 3551.8e-40
WP_099505614.1 MULTISPECIES: DUF5706 domain-containing protein [Streptomyce... 3542.5e-40
WP_055718714.1 DUF5706 domain-containing protein [Streptomyces niveiscabiei... 3525.1e-40
WP_143599211.1 DUF5706 domain-containing protein [Streptomyces sp. S1D4-14]... 3501.0e-39

PSORT result

LocalizationCertaintyPSORT said
membrane0.5861 Seems to have no N-terminal signal seq.