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IDSAVERM_7531 TypeCDS
From8973169 nt length1254
To8974422 aa length417
Gene pI5.35
Definitionputative transcriptional regulator M.W (Da)44982
NotePF01381: Helix-turn-helix AseI frg.D
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
samSAM23877_4040 XRE family transcriptional regulator1207.0e-31
scabSCAB21311 putative transcriptional regulator1252.0e-32
saceSACE_1141 transcriptional regulator, XRE family1314.0e-35
nfarnfa34630 hypothetical protein1072.5e-24

*sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain15-7442.08.2e-11

HTH_31Helix-turn-helix20-7325.41e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_217240105.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 16350.0e+00
WP_138058503.1 helix-turn-helix domain-containing protein [Streptomyces mar... 14500.0e+00
WP_079056822.1 helix-turn-helix domain-containing protein [Streptomyces niv... 14420.0e+00
WP_078630711.1 helix-turn-helix domain-containing protein [Streptomyces ros... 14340.0e+00
WP_138905919.1 helix-turn-helix domain-containing protein [Streptomyces chr... 14330.0e+00
WP_217246106.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14320.0e+00
WP_189594246.1 helix-turn-helix domain-containing protein [Streptomyces mas... 14280.0e+00
NEA19609.1 helix-turn-helix transcriptional regulator [Streptomyces halstedi... 14240.0e+00
WP_190136165.1 helix-turn-helix domain-containing protein [Streptomyces lon... 14160.0e+00
WP_084701110.1 helix-turn-helix domain-containing protein [Streptacidiphilu... 14050.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.1659 Seems to have no N-terminal signal seq.