| ID | SAVERM_770
| Type | CDS
|
| From | 921387
| nt length | 846
|
| To | 920542
| aa length | 281
|
| Gene |
| pI | 4.42
|
| Definition | putative dehydrogenase
| M.W (Da) | 29680
|
| Note | PF00106: short chain dehydrogenase
| AseI frg. | A
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5097 short-chain oxidoreductase | 335 | 4.0e-117
|
| sam | SAM23877_4874 Short-chain oxidoreductase | 338 | 3.0e-118
|
| scab | SCAB88651 putative dehydrogenase | 195 | 5.0e-62
|
| sace | SACE_7068 short-chain dehydrogenase/reductase SDR | 191 | 8.0e-61
|
| nfar | nfa24040 short chain dehydrogenase | 179 | 3.2e-46
|
| bsub | BG10863 yusZ, yvxA; similar to retinol dehydrogenase | 134 | 7.9e-33
|
| paer | PA1379 [gene=PA1379] [prot=probable short-chain dehydrogenase] [comment=PA1379] | 202 | 2.8e-53
|
*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; bsub, Bacillus subtilis; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| adh_short | 1 | short chain dehydrogenase | 6-190 | 175.1 | 1e-51
|
| adh_short_C2 | 1 | Enoyl-(Acyl carrier protein) reductase | 12-214 | 135.9 | 1.4e-39
|
| KR | 1 | KR domain | 8-165 | 39.4 | 5.1e-10
|
| Epimerase | 1 | NAD dependent epimerase/dehydratase family | 8-179 | 25.0 | 1.1e-05
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1007 | Seems to have no N-terminal signal seq.
|