SAVERM

ID SAVERM_809 Type CDS
From 963100 nt length 528
To 962573 aa length 175
Gene sig9 pI 11.13
Definition putative RNA polymerase ECF-subfamily sigma factor M.W (Da) 19141
Note PF08281: Sigma-70, region 4 AseI frg. A
SignalP v.4.0 Non-secretory protein | plot Category RNA initiation

Orthologs (if any)

Bacteria*

Reciprocally best hit to

Score

E-value

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4_2	1	Sigma-70, region 4	2-36	33.1	3.1e-08

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_237529103.1	hypothetical protein [Streptomyces sp. SID5469]	775	8.7e-104
WP_086722404.1	RNA polymerase sigma-70 factor [Streptomyces carpinensis]	633	2.4e-80
WP_225803312.1	RNA polymerase sigma factor SigJ [Streptomyces sp. NK15101]	629	8.2e-80
WP_226872215.1	RNA polymerase sigma factor SigJ [Microbispora sitophila]	623	4.4e-79
WP_230984516.1	RNA polymerase sigma factor SigJ [Microbispora oryzae]	623	5.2e-79
		623	6.0e-79
WP_079312499.1	RNA polymerase sigma factor SigJ [Microbispora sp. GKU 823] ...	623	6.4e-79
WP_204047401.1	RNA polymerase sigma factor SigJ [Microbispora siamensis] >d...	623	7.2e-79
		623	7.3e-79
WP_139636234.1	MULTISPECIES: RNA polymerase sigma factor SigJ [Nonomuraea] ...	611	4.3e-77

PSORT result

Localization	Certainty	PSORT said
cytoplasm	0.2437	Seems to have no N-terminal signal seq.

ID	SAVERM_809	Type	CDS
From	963100	nt length	528
To	962573	aa length	175
Gene	sig9	pI	11.13
Definition	putative RNA polymerase ECF-subfamily sigma factor	M.W (Da)	19141
Note	PF08281: Sigma-70, region 4	AseI frg.	A
SignalP v.4.0	Non-secretory protein \| plot	Category	RNA initiation