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IDSAVERM_826 TypeCDS
From977664 nt length204
To977461 aa length67
GenecspD1 pI4.56
Definitionputative cold shock protein M.W (Da)7187
NotePF00313: 'Cold-shock' DNA-binding domain AseI frg.A
SignalP v.4.0Non-secretory protein | plot Categoryadaptation to atypical conditions


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
bsubBG11024 cspC; cold shock protein949.9e-22

*bsub, Bacillus subtilis;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CSD1'Cold-shock' DNA-binding domain3-66112.17.7e-33

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053694109.1 cold-shock protein [Streptomyces sp. WM6372] >gb 3269.1e-39
WP_053724154.1 MULTISPECIES: cold-shock protein [Streptomyces] >lcl 3251.6e-38
WP_037603720.1 cold-shock protein [Streptacidiphilus rugosus] 3224.7e-38
WP_126882941.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3216.7e-38
WP_093878385.1 cold-shock protein [Streptomyces sp. TLI_105] >emb 3216.8e-38
WP_161705202.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3207.0e-38
WP_214921741.1 cold-shock protein [Streptomyces sp. ISL-98] >lcl 3207.6e-38
WP_190185764.1 cold-shock protein [Streptomyces cirratus] >dbj 3191.3e-37
WP_165260076.1 cold-shock protein [Streptomyces scabichelini] >gb 3181.4e-37
WP_225634605.1 cold-shock protein [Streptomyces solaniscabiei] 3181.5e-37

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.3479 Seems to have no N-terminal signal seq.