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IDSAVERM_828 TypeCDS
From982674 nt length3093
To979582 aa length1030
Gene pI6.29
Definitionputative rhamnosidase M.W (Da)111885
NotePF05592: Bacterial alpha-L-rhamnosidase AseI frg.A
SignalP v.4.0Non-secretory protein | plot Categoryspecific pathways


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO0488 hypothetical protein5970.0e+00
samSAM23877_1085 putative alpha-L-rhamnosidase A5480.0e+00
scabSCAB22771 putative glycosyl hydrolase5890.0e+00
nfarnfa34020 glycosyl hydrolase5626.0e-161
bsubBG10010 yybT; unknown304.2e-01

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; bsub, Bacillus subtilis;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Bac_rhamnosid6H1Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain599-930415.21.9e-124

Bac_rhamnosid_N1Alpha-L-rhamnosidase N-terminal domain314-483227.01.1e-67

Bac_rhamnosid1Bacterial alpha-L-rhamnosidase concanavalin-like domain495-593130.22.2e-38

Bac_rhamnosid_C1Bacterial alpha-L-rhamnosidase C-terminal domain932-100781.62.4e-23

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_189874408.1 family 78 glycoside hydrolase catalytic domain [Streptomyces... 46110.0e+00
MPY48816.1 Bacterial alpha-L-rhamnosidase [Streptomyces acidicola] 45640.0e+00
45540.0e+00
GGZ64418.1 rhamnosidase [Streptomyces bluensis] 45530.0e+00
WP_200400906.1 family 78 glycoside hydrolase catalytic domain [Streptomyces... 44800.0e+00
WP_143642401.1 family 78 glycoside hydrolase catalytic domain [Streptomyces... 44780.0e+00
WP_220141292.1 family 78 glycoside hydrolase catalytic domain [Streptomyces... 44780.0e+00
WP_055614234.1 family 78 glycoside hydrolase catalytic domain [Streptomyces... 44650.0e+00
WP_190231245.1 family 78 glycoside hydrolase catalytic domain [Streptomyces... 44570.0e+00
WP_062650157.1 family 78 glycoside hydrolase catalytic domain [Streptomyces... 44420.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.1044 Seems to have no N-terminal signal seq.